Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8670 289 5e-76 seq7850 104 4e-20 >seq8670 Length=8198 Score = 289 bits (320), Expect = 5e-76 Identities = 220/257 (86%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3351 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3292 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||| | |||||||| |||| || ||| || ||||| ||||||||||||| Sbjct 3291 CCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATCGTCCCCCTAAGAAGCCAGCG 3233 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | | | | || |||||||||| || |||||||||||||||||| |||||| Sbjct 3232 GTCCGCAAGCGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTAA 3174 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 3173 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGAA 3114 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 3113 AGAGCTCTCAATCTGTC 3097 >seq7850 Length=1107 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1052 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796733076270