Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8670 491 8e-137 seq4289 167 4e-39 seq4477 75.2 2e-11 >seq8670 Length=8198 Score = 491 bits (544), Expect = 8e-137 Identities = 286/295 (97%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||| Sbjct 7258 TACTAAATTGAATTACCGTTGCGGCGATATTCATCAGTAGGGTAAAACTAACCTGTCTCA 7199 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7198 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7139 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7138 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 7079 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7078 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 7019 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7018 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6964 >seq4289 Length=9205 Score = 167 bits (184), Expect = 4e-39 Identities = 95/97 (98%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGC 229 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 7328 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCGTTGTGGTAACTTTTCTGGC 7269 Query 230 ACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||||||||||||||||||| Sbjct 7268 ACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 7232 >seq4477 Length=8800 Score = 75.2 bits (82), Expect = 2e-11 Identities = 60/76 (79%), Gaps = 8/76 (11%) Strand=Plus/Plus Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2282 CAGTTATCCCTGTGGTAACTTTTCTGNNNNNNN--------AATTTCGAGGGACTAAAGG 2333 Query 262 ATCGATAGGCCACACT 277 |||||||||||| ||| Sbjct 2334 ATCGATAGGCCATACT 2349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854325923520