Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq8670 491 8e-137
seq4289 167 4e-39
seq4477 75.2 2e-11
>seq8670
Length=8198
Score = 491 bits (544), Expect = 8e-137
Identities = 286/295 (97%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 7258 TACTAAATTGAATTACCGTTGCGGCGATATTCATCAGTAGGGTAAAACTAACCTGTCTCA 7199
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7198 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7139
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7138 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 7079
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7078 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 7019
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7018 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6964
>seq4289
Length=9205
Score = 167 bits (184), Expect = 4e-39
Identities = 95/97 (98%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGC 229
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 7328 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCGTTGTGGTAACTTTTCTGGC 7269
Query 230 ACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
|||||||||||||||||||||||||||||||||||||
Sbjct 7268 ACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 7232
>seq4477
Length=8800
Score = 75.2 bits (82), Expect = 2e-11
Identities = 60/76 (79%), Gaps = 8/76 (11%)
Strand=Plus/Plus
Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2282 CAGTTATCCCTGTGGTAACTTTTCTGNNNNNNN--------AATTTCGAGGGACTAAAGG 2333
Query 262 ATCGATAGGCCACACT 277
|||||||||||| |||
Sbjct 2334 ATCGATAGGCCATACT 2349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854325923520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |