Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq8670 295 1e-77
seq8574 113 7e-23
>seq8670
Length=8198
Score = 295 bits (326), Expect = 1e-77
Identities = 240/284 (85%), Gaps = 9/284 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||
Sbjct 7256 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTCTGCGGCTGTCTGACCAGGCAGT 7313
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 7314 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7373
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178
||||| || ||| || || |||| | ||||| |||||||||||||| || |||| ||
Sbjct 7374 GAACGCGGCGATGCTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTCCGGGCCGCGC 7433
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAA---GCGCGGGGCGCTCAGCTGGCGGA 235
|||| ||||||||||| | || | | |||||| || ||||| || |||||||| |
Sbjct 7434 ACCTCAGCAGGCCGGCGATGGCCCCCGGGCGGAAGTTGCCCGGGG-GC-GAGCTGGCGAA 7491
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACC 279
||||||| |||||| |||| |||||||||||| |||||||||||
Sbjct 7492 TTGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGACC 7535
>seq8574
Length=1198
Score = 113 bits (124), Expect = 7e-23
Identities = 90/107 (84%), Gaps = 1/107 (1%)
Strand=Plus/Minus
Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGG 231
|||| ||||||||||||||||||| ||| ||||||| |||| |||||| ||| ||
Sbjct 1198 GCCCAGAACCTTAGCAGGCCGGCAGCGGTCGTCCCGTGGAATT-CGGGGCTTCTAGCCGG 1140
Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| ||||||||||||| | |||||||||| |||||||||||||||||
Sbjct 1139 TGTATTGCAATTTCACAACGCGCAGGGATGAATCCTTTGCAGACGAC 1093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819131194880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |