Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq8670 295 1e-77 seq8574 113 7e-23 >seq8670 Length=8198 Score = 295 bits (326), Expect = 1e-77 Identities = 240/284 (85%), Gaps = 9/284 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| |||||||||| |||||||||||||||||||||| Sbjct 7256 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTCTGCGGCTGTCTGACCAGGCAGT 7313 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 7314 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7373 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| || || |||| | ||||| |||||||||||||| || |||| || Sbjct 7374 GAACGCGGCGATGCTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTCCGGGCCGCGC 7433 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAA---GCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||||||| | || | | |||||| || ||||| || |||||||| | Sbjct 7434 ACCTCAGCAGGCCGGCGATGGCCCCCGGGCGGAAGTTGCCCGGGG-GC-GAGCTGGCGAA 7491 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACC 279 ||||||| |||||| |||| |||||||||||| ||||||||||| Sbjct 7492 TTGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGACC 7535 >seq8574 Length=1198 Score = 113 bits (124), Expect = 7e-23 Identities = 90/107 (84%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGG 231 |||| ||||||||||||||||||| ||| ||||||| |||| |||||| ||| || Sbjct 1198 GCCCAGAACCTTAGCAGGCCGGCAGCGGTCGTCCCGTGGAATT-CGGGGCTTCTAGCCGG 1140 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||||||||||||| | |||||||||| ||||||||||||||||| Sbjct 1139 TGTATTGCAATTTCACAACGCGCAGGGATGAATCCTTTGCAGACGAC 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819131194880