Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq8670 839 0.0
seq4279 244 3e-62
>seq8670
Length=8198
Score = 839 bits (930), Expect = 0.0
Identities = 490/505 (97%), Gaps = 1/505 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2381 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2322
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2321 CCCCGGATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2262
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2261 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 2202
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2201 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 2142
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2141 CAAGGCCATGCGATTCGTGCAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 2082
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2081 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCCGCATGTATTAGCTCTAG 2022
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2021 AATTACCACAGGTATCCATGTAGCAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1962
Query 421 GCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1961 GCCATTCGCAGTTTCACCGTATAGATTTGCTTATACTTAGACATGCATGGCTTAATCTTT 1902
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 1901 GAGACAAGCATATGACTACTGGCAG 1877
>seq4279
Length=11953
Score = 244 bits (270), Expect = 3e-62
Identities = 154/168 (92%), Gaps = 9/168 (5%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 168 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 109
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 108 CCCCGGATCGGGATTG---------CGCGCCTGCTGCCTTCCTTGGATGCGGTAGCCGTT 58
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168
|||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 57 TCTCAGGCTCCCTCCCCCGAATCGAACCCTAATTCCCCGTTACCCGTT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510269048320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |