Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq8670 839 0.0 seq4279 244 3e-62 >seq8670 Length=8198 Score = 839 bits (930), Expect = 0.0 Identities = 490/505 (97%), Gaps = 1/505 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2381 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2322 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2321 CCCCGGATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2262 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2261 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 2202 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2201 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 2142 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 2141 CAAGGCCATGCGATTCGTGCAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 2082 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2081 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCCGCATGTATTAGCTCTAG 2022 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2021 AATTACCACAGGTATCCATGTAGCAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1962 Query 421 GCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1961 GCCATTCGCAGTTTCACCGTATAGATTTGCTTATACTTAGACATGCATGGCTTAATCTTT 1902 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 1901 GAGACAAGCATATGACTACTGGCAG 1877 >seq4279 Length=11953 Score = 244 bits (270), Expect = 3e-62 Identities = 154/168 (92%), Gaps = 9/168 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 168 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 109 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 108 CCCCGGATCGGGATTG---------CGCGCCTGCTGCCTTCCTTGGATGCGGTAGCCGTT 58 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 57 TCTCAGGCTCCCTCCCCCGAATCGAACCCTAATTCCCCGTTACCCGTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510269048320