Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 122 7e-23
>seq5240
Length=8030
Score = 122 bits (134), Expect = 7e-23
Identities = 332/503 (66%), Gaps = 13/503 (3%)
Strand=Plus/Minus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGA 61491
||| || ||||||||| | |||||||| ||| |||| | | || |||| |||||
Sbjct 4430 GAAGGCTGATTGGGCCATTCATTGGATC--CAGGACAAGGAGTCGACTTTTGCCCAACGA 4373
Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551
|| |||| || || | ||||||||| | |||||| || || ||||| | |||||
Sbjct 4372 CTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATTTGCTTCCATCTTC 4313
Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611
||||||||||| || || | |||||||| |||| ||| |||||| |||| || ||
Sbjct 4312 TGGTTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCAAATGAGCTGATTTCGCGT 4253
Query 61612 GACGAGGGCATGCATTGTGATTTTG-CTG--TTTTGCTATTCAAACGCTATCTGGTGAAT 61668
||||||||| |||| || |||| ||| | ||| ||| | |||| |
Sbjct 4252 GACGAGGGCCTGCACACCGACTTTGCCTGCCTCTTG---TTC---TCCCATCTAAACCAC 4199
Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728
|| || ||||| | || ||| | ||| || || | || || || ||
Sbjct 4198 CGCCCCAGCAAGGAGGTCATCCAAGATATTATCACTGACGCTGTTGCAATTGAGCAAGAG 4139
Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788
|| | || || || | || || || || |||| ||||| | || |||| ||
Sbjct 4138 TTCTTAACCGAGGCCCTTCCAGTTTCTCTGCTCGGAATGAACTCGAAGCTGATGTGTCAA 4079
Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848
|| || || || ||||| || | || | || | | || | ||| | ||| |||
Sbjct 4078 TACATCGAGTTCGTTGCTGATAGGCTCCTCGTTGCCCTTGGAAACAAGAAGCACTACAAT 4019
Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908
|| || || |||||||||||||| | || || ||| ||| || || || || |||
Sbjct 4018 GTGACCAATCCCTTTGATTTCATGGAAAGTATATCTTTGGCTGGTAAAACCAACTTCTTC 3959
Query 61909 GAGAAACGTGTAGGCGACTATCA 61931
||||| ||||| |||||||||||
Sbjct 3958 GAGAAGCGTGTCGGCGACTATCA 3936
Score = 118 bits (130), Expect = 8e-22
Identities = 205/295 (69%), Gaps = 5/295 (2%)
Strand=Plus/Minus
Query 61088 TTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGT 61147
|||||| |||||||| || || ||||| || |||||||||| || ||| | ||| | |
Sbjct 4841 TTTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACGGCTGAAGAGATTGATCTAT 4782
Query 61148 CCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204
||||||| || | |||||| | || | | | ||| | | |||||| |
Sbjct 4781 CCAAAGATCTGCAAGACTGGAACAACCGCCTCAACAATGATGAGCGGTACTTCATTTCCC 4722
Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264
||| |||||||||||||||| || || || |||||||| ||||| | | || || |
Sbjct 4721 GTGTCCTGGCGTTCTTTGCCGCGTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGCT 4662
Query 61265 TC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| ||| ||||| || | | || || ||||| ||||| || || ||||| |||
Sbjct 4661 TCAGCG-GCGAGGTCCAGATCCCTGAAGCTCGTTGCTTCTATGGATTTCAGATCATGATG 4603
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|| || ||||||| |||| ||| | |||||||| || ||||| | |||||
Sbjct 4602 GAAAACATCCACTCAGAGACATACTCGTTGCTCATCGACACCTACATTAAGGAGC 4548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397525990728800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |