Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5240 122 7e-23 >seq5240 Length=8030 Score = 122 bits (134), Expect = 7e-23 Identities = 332/503 (66%), Gaps = 13/503 (3%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGA 61491 ||| || ||||||||| | |||||||| ||| |||| | | || |||| ||||| Sbjct 4430 GAAGGCTGATTGGGCCATTCATTGGATC--CAGGACAAGGAGTCGACTTTTGCCCAACGA 4373 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 || |||| || || | ||||||||| | |||||| || || ||||| | ||||| Sbjct 4372 CTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATTTGCTTCCATCTTC 4313 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||||||||||| || || | |||||||| |||| ||| |||||| |||| || || Sbjct 4312 TGGTTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCAAATGAGCTGATTTCGCGT 4253 Query 61612 GACGAGGGCATGCATTGTGATTTTG-CTG--TTTTGCTATTCAAACGCTATCTGGTGAAT 61668 ||||||||| |||| || |||| ||| | ||| ||| | |||| | Sbjct 4252 GACGAGGGCCTGCACACCGACTTTGCCTGCCTCTTG---TTC---TCCCATCTAAACCAC 4199 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 || || ||||| | || ||| | ||| || || | || || || || Sbjct 4198 CGCCCCAGCAAGGAGGTCATCCAAGATATTATCACTGACGCTGTTGCAATTGAGCAAGAG 4139 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || | || || || | || || || || |||| ||||| | || |||| || Sbjct 4138 TTCTTAACCGAGGCCCTTCCAGTTTCTCTGCTCGGAATGAACTCGAAGCTGATGTGTCAA 4079 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || || ||||| || | || | || | | || | ||| | ||| ||| Sbjct 4078 TACATCGAGTTCGTTGCTGATAGGCTCCTCGTTGCCCTTGGAAACAAGAAGCACTACAAT 4019 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 || || || |||||||||||||| | || || ||| ||| || || || || ||| Sbjct 4018 GTGACCAATCCCTTTGATTTCATGGAAAGTATATCTTTGGCTGGTAAAACCAACTTCTTC 3959 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| ||||| ||||||||||| Sbjct 3958 GAGAAGCGTGTCGGCGACTATCA 3936 Score = 118 bits (130), Expect = 8e-22 Identities = 205/295 (69%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 61088 TTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGT 61147 |||||| |||||||| || || ||||| || |||||||||| || ||| | ||| | | Sbjct 4841 TTTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACGGCTGAAGAGATTGATCTAT 4782 Query 61148 CCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204 ||||||| || | |||||| | || | | | ||| | | |||||| | Sbjct 4781 CCAAAGATCTGCAAGACTGGAACAACCGCCTCAACAATGATGAGCGGTACTTCATTTCCC 4722 Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264 ||| |||||||||||||||| || || || |||||||| ||||| | | || || | Sbjct 4721 GTGTCCTGGCGTTCTTTGCCGCGTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGCT 4662 Query 61265 TC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 || ||| ||||| || | | || || ||||| ||||| || || ||||| ||| Sbjct 4661 TCAGCG-GCGAGGTCCAGATCCCTGAAGCTCGTTGCTTCTATGGATTTCAGATCATGATG 4603 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 || || ||||||| |||| ||| | |||||||| || ||||| | ||||| Sbjct 4602 GAAAACATCCACTCAGAGACATACTCGTTGCTCATCGACACCTACATTAAGGAGC 4548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397525990728800