Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq84 250 4e-64 seq63 250 4e-64 seq60 250 4e-64 seq57 250 4e-64 >seq84 Length=29190 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 8847 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 8790 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 8789 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 8730 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 8729 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 8670 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8669 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 8621 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 16964 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 16907 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 16906 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 16847 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 16846 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 16787 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16786 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 16738 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 25080 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 25023 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 25022 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 24963 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 24962 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 24903 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24902 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 24854 Score = 241 bits (266), Expect = 2e-61 Identities = 194/229 (85%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 736 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 679 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| || |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 678 CTCGTTGAAGAG-AATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 620 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 619 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 560 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 559 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 511 >seq63 Length=18225 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 2152 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 2095 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 2094 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 2035 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 2034 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 1975 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1974 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1926 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 10266 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 10209 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 10208 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 10149 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 10148 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 10089 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10088 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 10040 Score = 114 bits (126), Expect = 2e-23 Identities = 67/68 (99%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 18223 TCAGTGTAGCGCGCGTGCGGCC-AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 18165 Query 221 AAACTTCC 228 |||||||| Sbjct 18164 AAACTTCC 18157 >seq60 Length=35789 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 5993 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 5936 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 5935 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 5876 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 5875 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 5816 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5815 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5767 >seq57 Length=211543 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 205165 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 205108 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 205107 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 205048 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 205047 ACCCAGGCCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 204988 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 204987 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 204939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999213220