Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq84 168 8e-40
seq63 168 8e-40
seq60 168 8e-40
seq57 168 8e-40
>seq84
Length=29190
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 8058 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 7999
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 7998 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 7940
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 7939 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 7880
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 7879 GTGAGGCGGACC 7868
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 16175 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 16116
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 16115 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 16057
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 16056 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 15997
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 15996 GTGAGGCGGACC 15985
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 24291 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 24232
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 24231 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 24173
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 24172 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 24113
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 24112 GTGAGGCGGACC 24101
>seq63
Length=18225
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 1364 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 1305
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 1304 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 1246
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 1245 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 1186
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 1185 GTGAGGCGGACC 1174
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 9478 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 9419
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 9418 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 9360
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 9359 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 9300
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 9299 GTGAGGCGGACC 9288
Score = 167 bits (184), Expect = 3e-39
Identities = 153/191 (80%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 17593 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 17534
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 17533 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCCACA 17474
Query 126 CACCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCCG 184
||| ||||||| ||||| ||| ||| ||| | || |||| | ||| |
Sbjct 17473 -GCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCGG 17415
Query 185 TGAGGCGGACC 195
|||||||||||
Sbjct 17414 TGAGGCGGACC 17404
>seq60
Length=35789
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 5204 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 5145
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 5144 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 5086
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 5085 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 5026
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 5025 GTGAGGCGGACC 5014
>seq57
Length=211543
Score = 168 bits (186), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 204376 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 204317
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 204316 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 204258
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| ||||| ||| ||| ||| | || |||| | |||
Sbjct 204257 CAGCCAGTGAAGGCCATGGGGCTTCCCAGAAGGAAAGGTCCGGCCGGACCAGTGCACGCG 204198
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 204197 GTGAGGCGGACC 204186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199377272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |