Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq79 178 1e-39 seq73 138 9e-28 >seq79 Length=405269 Score = 178 bits (196), Expect = 1e-39 Identities = 434/649 (67%), Gaps = 8/649 (1%) Strand=Plus/Plus Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| || |||| | || ||||| |||||| ||||| ||| ||||||| || ||| Sbjct 293989 CCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAA 294048 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 ||||||||| || || ||||| | ||||| || || || | ||| | ||| || || Sbjct 294049 GAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAA 294108 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 ||| |||| ||||| || || ||||| || ||||| | ||| || ||| || || Sbjct 294109 GATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCC 294168 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 |||||||| || | ||| |||||||| || |||| ||| || |||| ||||| || Sbjct 294169 CTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGA 294228 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGAC 66611 |||||| || ||| | ||| || || ||||| || || ||||| || || | Sbjct 294229 GGAGCCATTCGTTCCGGCAATGTAAGAACC-AGTGCCACGAATGCGGTGAATGTTGAGGC 294287 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC-TGTCCGGAATATGCC 66669 |||||||||| || ||||| || || |||||| || | || |||| | | || || Sbjct 294288 CAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTC--GTAAATACC 294345 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 || || ||| |||| ||| | ||| |||| ||| | || |||| || || Sbjct 294346 CTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGT 294405 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 | || ||| ||||| || | ||| ||||| ||| | | |||||||| || || Sbjct 294406 ACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATA 294465 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849 || |||||||| || | | || || ||||| |||| ||| ||||| | | Sbjct 294466 TGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCAT 294525 Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGG 66908 || ||| || ||||| | || | || ||||| | | || || || || |||| | Sbjct 294526 GTGTTGGGGGCGTTC-AGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAG 294584 Query 66909 TCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 |||||| || ||||| ||| ||||| || | ||| || ||||| Sbjct 294585 TCTTGAATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGC 294633 >seq73 Length=4627324 Score = 138 bits (152), Expect = 9e-28 Identities = 285/422 (68%), Gaps = 3/422 (1%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||| || | || ||||||||||| || || | ||||| |||||||||||||| || Sbjct 220889 GTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCGATCTTCTGGTTGAAGAAACGGGGC 220948 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || || || || || ||| | || || || ||||||||| | || | Sbjct 220949 CTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATTTCTCGTGACGAGGGCTTACACACT 221008 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 ||||| || | | || ||| | || | || | ||||| | ||| ||| Sbjct 221009 GATTTCGCCTGTCTCCTCTTCTCTCACTTGC--GTCAC-CGTCCCAGCCAAGAGGCTGTC 221065 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 | ||| | ||| || || |||||||| ||||| || || | || ||| | || Sbjct 221066 GAGAGGATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCG 221125 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 ||| | || | || ||||| || |||| || || ||||| || || || || Sbjct 221126 GTCGCGCTTCTTGGAATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGAT 221185 Query 61810 CGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTC 61869 || || | || | |||||| | ||| ||||||| | | ||||||||||| ||| Sbjct 221186 CGCCTCCTCGTTGCTTTGGGCAACAAGAAAGTCTATAACTCCACCAACCCATTTGACTTC 221245 Query 61870 ATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 ||||||| || || |||| |||||||| || || ||||| || ||||| |||||||| Sbjct 221246 ATGGACAACATCTCCCTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTAC 221305 Query 61930 CA 61931 || Sbjct 221306 CA 221307 Score = 129 bits (142), Expect = 5e-25 Identities = 208/296 (70%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| ||||||||||| || || || || |||||||| | || || | ||| | Sbjct 220406 ATTTGGCAAATGTACAAAAAAGCAGAGGCGTCGTTCTGGACCGCAGAAGAAATTGATCTC 220465 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC---ATTTCATTAAA 61203 || |||||| | | |||||| | || || | ||| | | | ||||| | Sbjct 220466 TCAAAAGACCTTCACGACTGGAACAACAGATTGAATGATGACGAGCGGTACTTCATCTCA 220525 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || ||||| ||||| ||||| ||||| || |||||||| || || | | || ||| Sbjct 220526 CACGTCTTGGCATTCTTCGCCGCGTCGGATGGCATCGTCAACGAAAACCTGGTCGAGCGT 220585 Query 61264 TTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||| || || | || || | ||||| || || ||||||||||||||||| || Sbjct 220586 TTCAGCGGAGAAGTT-CAGGTTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 220644 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||| ||| | ||||| |||| ||| | |||||||| || || |||| ||||| Sbjct 220645 GGAAAATATTCACTCTGAGACCTACTCCCTCCTCATCGACACATATATCAAGGAGC 220700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567476701120