Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11 352 2e-92 >seq11 Length=1431289 Score = 352 bits (390), Expect = 2e-92 Identities = 1239/1896 (65%), Gaps = 84/1896 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | | || || || | ||| | ||||||||||| || || Sbjct 453245 ATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACATTCCCGT 453186 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGC 65194 |||||| || ||| |||| | ||| ||||| | | | || |||| | | | || Sbjct 453185 CTTGAGACCGAGCTT-CCAACCCGTGAAGTGCAT-GCTCGTGATCTTGCCCATAGTGGGT 453128 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGC 65253 || || || || || | ||||| |||||||||| |||| |||||| || ||||| Sbjct 453127 TCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATG-AACGCACCACGGTCGGCAGC 453069 Query 65254 CATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-A 65309 ||| | ||| | |||| | || || ||||| || |||||||||| | | | | Sbjct 453068 CATCTGGACAACGGTACGCTGA---GAGATTTCCCAAACCGTCTTGTACAAT-GCCTTGA 453013 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 ||| ||||| |||| ||||| ||||||| ||||||||||| || Sbjct 453012 TATCAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCT 452953 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAA---CCAAGTGACGATTG 65425 ||| || ||||||| ||||| |||| ||| | |||| ||||| | || Sbjct 452952 TCATGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGG----TTA 452897 Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485 | || |||||||| || | || |||||||| ||||||||||| ||| || ||| Sbjct 452896 ACAACCTGGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCA 452837 Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAAC 65545 ||| | ||| |||| || | ||||| | ||| || || |||||||| ||||||||| Sbjct 452836 AAGCACTCATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAAC 452777 Query 65546 AATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCG----TCCCAGTTCCA 65601 || ||| || | |||| | | || | || || || | ||||||| ||| Sbjct 452776 AAACTGTTACGGACACCGTGCTGCT---TGATCTGCTGCT-TTAGACTATCCCAGTCCCA 452721 Query 65602 CA--TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG 65659 | ||||| | ||||||| ||||| || | ||| ||| | || ||| Sbjct 452720 GAGATCGGTGGGC--TTGACATCC------CACATGTCGTATTGAAGGATACC----CTG 452673 Query 65660 G----CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715 | |||| || || | | || |||| || ||||| || || | || | Sbjct 452672 GGAGACCGGGGAGCCCTCGTAGCTGGCGTAGGGACCGAGTTCCTTAGCGAGCTC-CA--T 452616 Query 65716 GGTC----TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGT- 65770 || | || || ||||| || ||||||||||| || || |||||| || | Sbjct 452615 GGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTA-ACTTA 452558 Query 65771 GCCTCAT-CGCTCTCGTACGGCATACCCATCAGG-ACAAAAGTGTCGGCCAGACCTTGAA 65828 |||||| || | ||| | || || | || | |||| ||||| |||||||| | Sbjct 452557 GCCTCAGGCGAT-TCGAATGGG-TATCGGAGAGCTAGGAAAGCATCGGCAAGACCTTGGA 452500 Query 65829 CTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGT 65888 | || | ||||||||||| || |||| ||| | ||||||||||| ||||||| Sbjct 452499 CACCCAATCCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGCCTCAGGTACGGGGTAGT 452440 Query 65889 AATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAA 65946 |||| || || || |||| ||| || ||||| || || | ||||| ||| Sbjct 452439 GGTTGACCTCAATGATCTTGTTCAGATTTCGCACGACCACCTGGACAA--CGTCGTGCAA 452382 Query 65947 TTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAG 66006 | | |||||| |||| || | | | | ||||| || || | Sbjct 452381 CTTCTGGAAATCG-------TAGG-----CGCCCGCGTTGTAGTCCACATACGAAGGTAA 452334 Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 |||||| || || |||||||| ||||| | ||| |||||||| | ||||| | ||| || Sbjct 452333 GGCAAGGGAAGCCAGGTTGCACACAGCGACCTCATCAGGAGCCGAGTACTCAATAATCTC 452274 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 |||||| || ||| | ||| || || |||| |||| || || |||||||| ||||| Sbjct 452273 GGTGCAGAGGTTAGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 452214 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 ||||||||| | |||| | || | || |||||| || | ||| | |||||| | Sbjct 452213 GTGATCCTTGTAAAGCATGAATGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATA 452154 Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGT 66245 |||||| | ||||| ||| | | | ||| | || | | |||||| | |||| Sbjct 452153 CCAAAGTTTCTGGGCCTTGACCTTCTGG-CGGCCACGGCCCTCGGCTTCGTACTTCTCGT 452095 Query 66246 AGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACA 66305 | || ||||| || || | || || | || | || |||| || ||||||| Sbjct 452094 ACAGAGCCTCGAACTCATCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACA 452035 Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 | |||| ||| ||||| | || || ||||| ||| || ||||| || |||||||| | Sbjct 452034 TGAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAG 451975 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425 | ||| |||||||| || || ||||| | ||||| || || || | || | || Sbjct 451974 CAAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCCAAGA 451915 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 |||| || | || | ||||| || || ||||||||||| || | || | ||| Sbjct 451914 ACTCGAAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTCTTGT 451855 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 |||||| ||||| ||||| | || |||||||||||||| | ||| ||||| | | Sbjct 451854 TGCCACCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACAATAC 451795 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 ||||||| | || ||||| ||| | ||| ||||| | || ||| |||||| | Sbjct 451794 CGTTAGAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGAACGT 451735 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAA 66663 | |||||||||||||| ||| |||| ||||| ||||||| || | |||| | Sbjct 451734 TGAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTC--ATA 451677 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTT 66723 || || |||||| |||| |||| ||| | ||| | || || ||| || | | Sbjct 451676 GATACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCCTG 451617 Query 66724 GGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTA 66783 ||| || |||| ||| |||||||| | ||||| || || || | || |||||| Sbjct 451616 GGGGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAAATATTTGCTGGACATGAG 451557 Query 66784 ATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCAT 66843 |||||| ||||| ||||| |||| || || || || |||| ||| ||||| Sbjct 451556 ATTGTATGTCTCAATGACCTTTTCAACGTCGTCACCCCAGATACCGACGGCAACACGCAT 451497 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 | | || || ||||| ||| | | | |||| | | | ||| || || || Sbjct 451496 GATCATGTGCTGCGGCCGCTCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCGCTC 451437 Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || ||||||| |||||||| ||| ||||| || Sbjct 451436 CAAAGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 451401 Score = 132 bits (146), Expect = 4e-26 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| ||||| | Sbjct 759187 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTT 759128 Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | || ||| | | | |||| | ||| | | ||||| Sbjct 759127 TCCAAGGATCTCCACGATTGGAACAACAGAATCAACGAG-GATGAGAAGTACTTCATCTC 759069 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| ||||||||||||||||||||||| ||||| | | || || Sbjct 759068 TCACATCCTTGCCTTCTTCGCCGCTTCGGACGGTATCGTCAACGAGAACCTTGTCGAGCG 759009 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| ||| | ||||| || | | || || || || |||||||| |||||||| | Sbjct 759008 TTTCAGCGGA-GAGGTTCAGATCCCCGAAGCTCGATGCTTCTACGGTTTCCAGATCATGA 758950 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | ||||||| || || ||||||| ||||| Sbjct 758949 TGGAGAACATCCACTCCGAGACCTACTCTCTTCTCATTGACACCTACATCAAGGAGC 758893 Score = 86.0 bits (94), Expect = 5e-12 Identities = 285/443 (64%), Gaps = 3/443 (1%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 || ||| | || || || | ||||||||| | || ||||| || | || ||| | ||| Sbjct 758714 CGTTTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATC 758655 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| | ||||| || || || |||||||| |||||||| ||| ||| | || || Sbjct 758654 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCC 758595 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 ||||||||||| | || || || || |||| ||| | | || || Sbjct 758594 CGCGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGTTC---TCCCACCTCAACAAC 758538 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 || || || || | ||||| | || || || | ||||| ||||| Sbjct 758537 CGCCCCAGCAAGCAGATGATTCAGGAGATCATCATGGACGCCGTCAAGATCGAGCAGGAG 758478 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || ||||| || || |||| | | ||| |||||||||| | || ||| |||| Sbjct 758477 TTCCTGACCGAGGCCCTGCCTTGCGCCCTCCTCGGCATGAACTCGAACCTCATGAAGCAG 758418 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || || || |||||||| || | |||| | || | || | |||| Sbjct 758417 TACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACCGG 758358 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 | ||||| || || || ||||| | || || || | |||||||| || || ||| Sbjct 758357 TCCGCCAACCCGTTCGACTTTATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTC 758298 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| || || ||||| || || Sbjct 758297 GAGAAGCGCGTCGGCGAGTACCA 758275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880