Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02]
40 sequences; 37,173,200 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq10 643 0.0
>seq10
Length=1233329
Score = 643 bits (712), Expect = 0.0
Identities = 406/436 (93%), Gaps = 5/436 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1124473 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCTCTTAGGACACCTGCGTTATG 1124414
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1124413 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1124354
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||| | |||||||||||||||||| ||| |||| || ||||||||||||||||||
Sbjct 1124353 GGCCCGCAAGGGACCTTAACGCCAGAAATTGGGCGGTAAAACCCAGTTCCGCTTCATTGA 1124294
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||
Sbjct 1124293 ATAAGTAAAGAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1124237
Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||||||| ||||| | ||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct 1124236 TTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1124178
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124177 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1124118
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124117 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1124058
Query 426 TTGGCTACCTTAAGAG 441
||||||||||||||||
Sbjct 1124057 TTGGCTACCTTAAGAG 1124042
Score = 179 bits (198), Expect = 1e-42
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123831 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 1123772
Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||| |||||||||
Sbjct 1123771 GAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1123730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199345920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |