Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10 643 0.0 >seq10 Length=1233329 Score = 643 bits (712), Expect = 0.0 Identities = 406/436 (93%), Gaps = 5/436 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1124473 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCTCTTAGGACACCTGCGTTATG 1124414 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1124413 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1124354 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||| | |||||||||||||||||| ||| |||| || |||||||||||||||||| Sbjct 1124353 GGCCCGCAAGGGACCTTAACGCCAGAAATTGGGCGGTAAAACCCAGTTCCGCTTCATTGA 1124294 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| || Sbjct 1124293 ATAAGTAAAGAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1124237 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||| Sbjct 1124236 TTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1124178 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124177 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1124118 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124117 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1124058 Query 426 TTGGCTACCTTAAGAG 441 |||||||||||||||| Sbjct 1124057 TTGGCTACCTTAAGAG 1124042 Score = 179 bits (198), Expect = 1e-42 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1123831 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 1123772 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1123771 GAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1123730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199345920