Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq610 423 3e-116
seq49 77.0 6e-12
>seq610
Length=7921
Score = 423 bits (468), Expect = 3e-116
Identities = 283/314 (90%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| |||||| |||| || ||||||||||||||||||||||| ||||||
Sbjct 5890 TGGTCCGGCCGGGTCTTTCCCTCTGTCGAACCGCATGCCCTTCACTGGGTGTGTCGGGGA 5949
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct 5950 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATAGTA 6009
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 6010 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 6069
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct 6070 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 6129
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| | ||||||||||||||||||||||| || ||||||||||||||||| || || ||
Sbjct 6130 ATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 6188
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 6189 ACGAAAGTTAGGGG 6202
>seq49
Length=122959
Score = 77.0 bits (84), Expect = 6e-12
Identities = 47/50 (94%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGT 54
|||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 119027 TGGTCCGGCCGGGCCTTTCCCTCTGGCGAACCGCATGCCCTTCACTGGGT 118978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915191955392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |