Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq610 401 3e-109 >seq610 Length=7921 Score = 401 bits (444), Expect = 3e-109 Identities = 343/421 (81%), Gaps = 7/421 (2%) Strand=Plus/Plus Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 ||||||| |||||| | | | ||| |||||| ||||||||||| |||| ||| Sbjct 53 CAGGCCAACATCAGTTTGTTGTTTGGGAGAAAGGCTTAGGGAATGTGGCTCCCTC--GGG 110 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382 |||||||||||| | ||| | || | | ||||||| ||||||| |||| ||| Sbjct 111 AGTGTTATAGCCCTTTGCATAATACCATTCGGCAG-ACTGAGGACCGCGCTTCGGCAAGG 169 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 ||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | | Sbjct 170 ATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTTA 229 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502 | ||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || | Sbjct 230 TGTGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGCT 289 Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 || ||| ||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 290 TC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATAT 345 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 | | |||||||||||| |||||||||||| || ||||||||||||||||||||||||| Sbjct 346 AGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTCT 405 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||| Sbjct 406 GGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGCG 465 Query 683 A 683 | Sbjct 466 A 466 Score = 268 bits (296), Expect = 4e-69 Identities = 163/173 (94%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || |||| Sbjct 7740 AGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 7799 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7800 CTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 7859 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 7860 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGC 7912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079981145450