Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq610 203 5e-50 seq174 104 4e-20 >seq610 Length=7921 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2545 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2602 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2603 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2662 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | | ||| |||| |||| | ||| ||| | ||||||||| |||| | Sbjct 2663 GAAAGCGACGAT--ACTCCCGCACGT-TTAGATGGACAAGAATAGGCTCCGGCTTAGTGT 2719 Query 181 CTTAGCAGGC 190 |||||||||| Sbjct 2720 CTTAGCAGGC 2729 >seq174 Length=64024 Score = 104 bits (114), Expect = 4e-20 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | || |||||||||||||||||||||||| |||| |||||| Sbjct 4927 GTACGAGAGGAACCACTAATTT--GAATAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 4870 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCC 99 | || ||||||| ||||| || || || |||||||||| Sbjct 4869 GTTGCTAAGCTACTATCTGTTGTATGATAGCTGAACGCC 4831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193024256