Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq76 329 3e-85 seq53 212 5e-50 >seq76 Length=103561 Score = 329 bits (364), Expect = 3e-85 Identities = 562/810 (69%), Gaps = 10/810 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| || ||||| || || || || ||||| ||||| | ||| ||||| ||| Sbjct 3000 ACAAACGACGGTAGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAG 2941 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| || ||||||||||| || || ||| || ||||||| |||| || || Sbjct 2940 TACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTG 2881 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| | ||||| ||||||||||||| |||| |||| | |||||||| ||||| | Sbjct 2880 CTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCC 2821 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 || | |||||||| ||| || | ||||| | || | | ||| | || | || Sbjct 2820 TCGAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGG-CGGCCGCGGCCCTCGCT 2762 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||||| | |||||| || ||||| ||||| | |||| ||||| || || Sbjct 2761 CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCA 2702 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 || || || ||||| || | ||| | | | || || ||||| ||| || || || Sbjct 2701 CTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTC 2642 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || ||||| ||||| ||| || ||||| || || |||||| ||||||| || || Sbjct 2641 GGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTT 2582 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 ||| | |||||||||||| |||| ||||||||||| || || |||||||| || || | Sbjct 2581 GCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGC 2522 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || || ||| |||||| ||||| || ||||| ||| ||||||||||| |||| Sbjct 2521 TCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAG 2462 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || |||| ||||| || |||| || ||||| | ||| || || || || Sbjct 2461 CATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCG 2402 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 ||| ||| || ||||| ||||||||||||||| |||| ||||| ||||||| Sbjct 2401 GATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTT 2342 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 || || | | || || |||||| |||| |||| ||| | | | ||||||| Sbjct 2341 CAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGA 2282 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGT--AAAG--T 66767 || |||| | || ||| | || ||| || || |||| ||||| || |||| | Sbjct 2281 TAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTT 2222 Query 66768 AATGGCGAGACATGTAATTGTACGTCTCGA 66797 | || |||||||| ||||||||||||| Sbjct 2221 ACTG----GACATGTAGTTGTACGTCTCGA 2196 Score = 134 bits (148), Expect = 1e-26 Identities = 336/497 (68%), Gaps = 20/497 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||||||||| | | || || |||| ||| | |||||||||||||| ||| Sbjct 3897 TCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTC 3838 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| |||| || || ||||| | || | ||||||| | | || || Sbjct 3837 TTGAGACCAAGCTTCCAACCAGCAAAGTGCAT-GCTGGTGATTTTGCCCATGGTAGGATC 3779 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || |||| |||||| |||||||||| || |||||||| || ||||| Sbjct 3778 TTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCAT 3719 Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACA-GGC---GACGTA 65309 | ||| | | || | || || |||||||| |||||||||| ||| || || Sbjct 3718 TTGCACAACGGTGCGCTGG---GAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGT- 3663 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACG-TGCAATAATGCGATT 65367 | || ||| || ||||| ||| | ||||| | || || || || || || Sbjct 3662 CGGCAG--GGATACTGGG-AATGTTCTGAATCGAACCGTTGTCGCTG--ATGATACGGTT 3608 Query 65368 ACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGAT 65427 ||| | || ||||| | ||| | |||| || | | | || | |||| Sbjct 3607 CTTCATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGAC 3548 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487 ||| ||||||||||| | || |||||||| ||||||||||| ||| ||| || || Sbjct 3547 GACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAA 3488 Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | |||| ||||||| || ||||| | || || |||||||||||||| || | | || Sbjct 3487 GCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAG 3428 Query 65548 TGAGTTTCGCAATCCGT 65564 |||||||||| |||| Sbjct 3427 CGAGTTTCGCACACCGT 3411 >seq53 Length=118516 Score = 212 bits (234), Expect = 5e-50 Identities = 565/855 (66%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 90600 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 90541 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| | | |||||| | | ||| | || | || || | ||||| Sbjct 90540 TCCAAAGATCTCCACGACTGGAACAACCGGCTTACCAAG-GACGAGCAGTACTTCATCTC 90482 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| |||||||| || || || || || ||||| ||||| | | || || Sbjct 90481 TCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCG 90422 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | ||||| || | | ||||| ||||| ||||| || |||||||| || Sbjct 90421 TTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGAT 90362 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | | | |||||||| ||||| | ||||| || Sbjct 90361 GGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTACATTAAGGAGCCTGC 90302 Query 61383 GGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 | || ||| ||||||| || || || || || || | || ||||| Sbjct 90301 CCAGCGC--ACGTACCTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCC 90244 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 || ||||| |||| |||||| | | | | || |||| | | || | | || Sbjct 90243 GACTGGGCTCTCAAGTGGATCTGCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCGCT 90184 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 ||||| | ||||| || | || || |||| | |||||| | ||||||||| || Sbjct 90183 TTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGCGC 90124 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || ||||| || |||||||| |||||||| || ||| |||| || || || ||||| Sbjct 90123 AAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGT 90064 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680 |||| ||| ||||| || | ||| | | ||| || || || || Sbjct 90063 CTGCACACTGACTTTGCCTGCCTGTTGTTCTCCCAC---CTGAACAACCGCCCTGGCAAG 90007 Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740 || | ||| | | || | || || || || || |||| || |||||||| Sbjct 90006 GAACTTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAG 89947 Query 61741 GCTTTGCC---CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||| | || || | |||| |||||||| || || ||| |||||||||||| Sbjct 89946 GCTCTTCCTTGCGGTTTACTC---GGCATGAACGCTGACCTGATGAAGCAGTATATTGAG 89890 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || |||||||||||||| || || | |||| | || || | || | | | || Sbjct 89889 TTCGTTGCCGACCGTCTCTTAGTGGCCCTTGGCAACGACAAGG-TGTACCGTGCTACCAA 89831 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | ||||| |||| |||||||| || |||||||||||||| Sbjct 89830 CCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACG 89771 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 89770 TGTTGGTGACTACCA 89756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563740928560