Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq270 87.8 7e-12 seq64 86.0 2e-11 >seq270 Length=41675 Score = 87.8 bits (96), Expect = 7e-12 Identities = 111/152 (73%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||| | | |||||||||| || ||||| || ||||| | Sbjct 23925 CAATGGTCATACGAGAAGGAATAGCGTGAGGGTTGATAATAATGTCGGGAGTGATGCCCT 23866 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||| || ||||||||||| | || | | ||||||||| || || || | | Sbjct 23865 CGCAGGTGAACGGCATATCTTCTTGGCGATAAGTTACACCAATGGTACCTTTCTGTCCGT 23806 Query 364545 AGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 ||||| |||||||| || ||||| ||||| Sbjct 23805 GACGAGACGCAAACTTATCACCAAT--CTGGG 23776 >seq64 Length=112477 Score = 86.0 bits (94), Expect = 2e-11 Identities = 206/312 (66%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 12730 GAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGA 12789 || ||| ||||| ||| || ||||||| | | ||| ||||||||||| | ||| || Sbjct 64812 GATAACGTCGTAGTAGATGACAGTCATGCCCATAGCCTCAGCTAGGACAGATAGCTGTGA 64753 Query 12790 ACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG 12849 |||||||| ||| ||||| || ||||| | ||||| || | | ||| | ||| || Sbjct 64752 ACCAATGTGACCGTAACCGACAATACCCAAAGTCTTGCCACGGATTTCCCAGCACTTGTG 64693 Query 12850 AGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909 || ||||||||| |||| |||| | || | || || | ||| || | Sbjct 64692 GGAGACCTTGTTCCAGGTGCCGCGGTGCATCTCCAGCGAACGGTCACCTAGCTGGCGGGC 64633 Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969 || ||| | || || |||| ||||| || ||| | | |||| |||||| || Sbjct 64632 CAGCGAAATGATTTCGCCGATGACTAGCTCAGCGACGGAACGCGAGTTGGCAAAGGGTGA 64573 Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029 || ||||| || || || | |||| ||| || || || ||||| | | || || Sbjct 64572 GTTGAAGACGGCGATACCGCGCTTGGCAGCATATTCGAGGTTGACCTGGTTGGTGCCGAT 64513 Query 13030 GCAGAAGCATCC 13041 ||| ||||| || Sbjct 64512 GCAAAAGCAGCC 64501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884865172055947