Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq270 87.8 7e-12
seq64 86.0 2e-11
>seq270
Length=41675
Score = 87.8 bits (96), Expect = 7e-12
Identities = 111/152 (73%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| ||||| | | |||||||||| || ||||| || ||||| |
Sbjct 23925 CAATGGTCATACGAGAAGGAATAGCGTGAGGGTTGATAATAATGTCGGGAGTGATGCCCT 23866
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| ||| || ||||||||||| | || | | ||||||||| || || || | |
Sbjct 23865 CGCAGGTGAACGGCATATCTTCTTGGCGATAAGTTACACCAATGGTACCTTTCTGTCCGT 23806
Query 364545 AGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576
||||| |||||||| || ||||| |||||
Sbjct 23805 GACGAGACGCAAACTTATCACCAAT--CTGGG 23776
>seq64
Length=112477
Score = 86.0 bits (94), Expect = 2e-11
Identities = 206/312 (66%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 12730 GAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGA 12789
|| ||| ||||| ||| || ||||||| | | ||| ||||||||||| | ||| ||
Sbjct 64812 GATAACGTCGTAGTAGATGACAGTCATGCCCATAGCCTCAGCTAGGACAGATAGCTGTGA 64753
Query 12790 ACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG 12849
|||||||| ||| ||||| || ||||| | ||||| || | | ||| | ||| ||
Sbjct 64752 ACCAATGTGACCGTAACCGACAATACCCAAAGTCTTGCCACGGATTTCCCAGCACTTGTG 64693
Query 12850 AGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909
|| ||||||||| |||| |||| | || | || || | ||| || |
Sbjct 64692 GGAGACCTTGTTCCAGGTGCCGCGGTGCATCTCCAGCGAACGGTCACCTAGCTGGCGGGC 64633
Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969
|| ||| | || || |||| ||||| || ||| | | |||| |||||| ||
Sbjct 64632 CAGCGAAATGATTTCGCCGATGACTAGCTCAGCGACGGAACGCGAGTTGGCAAAGGGTGA 64573
Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029
|| ||||| || || || | |||| ||| || || || ||||| | | || ||
Sbjct 64572 GTTGAAGACGGCGATACCGCGCTTGGCAGCATATTCGAGGTTGACCTGGTTGGTGCCGAT 64513
Query 13030 GCAGAAGCATCC 13041
||| ||||| ||
Sbjct 64512 GCAAAAGCAGCC 64501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884865172055947
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |