Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq60 627 4e-177
>seq60
Length=7889
Score = 627 bits (694), Expect = 4e-177
Identities = 541/662 (82%), Gaps = 20/662 (3%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 3340 AGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 3399
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3400 CTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 3459
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 3460 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 3519
Query 208 CAGACTTGC--CCG-CAGTT--GCTCAACCGGCCCCTCGGCCG-GTGCACTCTTCTGCGG 261
|||||||| | | ||||| ||| |||| | || ||||| | |
Sbjct 3520 CAGACTTGTTTCTGTCAGTTTTGCTTGTTT------TCGGACTTGTTTACTCTG-TCAGT 3572
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||| |||||| | | | ||| |||||| ||||||||||| |||| ||
Sbjct 3573 ACAGGCCAACATCAGTTTGTTGTTTGGGAGAAAGGCTTAGGGAATGTGGCTCCCTC--GG 3630
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||| | ||| | || | | ||||||| ||||||| |||| ||
Sbjct 3631 GAGTGTTATAGCCCTTTGCATAATACCATTCGGCAG-ACTGAGGACCGCGCTTCGGCAAG 3689
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
|||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | |
Sbjct 3690 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 3749
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
| ||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || |
Sbjct 3750 ATGTGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGC 3809
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| ||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 3810 TTC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 3865
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
| | |||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct 3866 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 3925
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||
Sbjct 3926 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 3985
Query 682 GA 683
||
Sbjct 3986 GA 3987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079980416150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |