Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq60 203 5e-50 seq828 158 2e-36 >seq60 Length=7889 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 6066 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6123 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6124 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 6183 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | | ||| |||| |||| | ||| ||| | ||||||||| |||| | Sbjct 6184 GAAAGCGACGAT--ACTCCCGCACGT-TTAGATGGACAAGAATAGGCTCCGGCTTAGTGT 6240 Query 181 CTTAGCAGGC 190 |||||||||| Sbjct 6241 CTTAGCAGGC 6250 >seq828 Length=1230 Score = 158 bits (174), Expect = 2e-36 Identities = 111/123 (90%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||| Sbjct 1225 GTACGAGAGGAACCGCT-AATTTAGA-TAATTGGTTTTTGCGGCTGTCTGACCGGGCAGT 1168 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 || |||||||||| ||||| || || || |||||||||||||||||||||||||| |||| Sbjct 1167 GCTGCGAAGCTACTATCTGTTGTATAATAGCTGAACGCCTCTAAGTCAGAATCCA-GCCA 1109 Query 121 GAA 123 ||| Sbjct 1108 GAA 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192754432