Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15]
2,094 sequences; 34,423,103 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq2072 78.8 9e-13
seq1190 78.8 9e-13
>seq2072
Length=224
Score = 78.8 bits (86), Expect = 9e-13
Identities = 71/87 (82%), Gaps = 3/87 (3%)
Strand=Plus/Minus
Query 69 CGACTGTTTATTAAAAACACAGCACTCTGC--AAACACGAAAG-TGGACGTATAGGGTGT 125
|||||||||| | ||||||||||||||||| ||| | |||| | | |||||| ||||
Sbjct 134 CGACTGTTTAATTAAAACACAGCACTCTGCTGAAAGATGAAAAATCTAAGTATAGAGTGT 75
Query 126 GACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| |||||||||||||| |||||||
Sbjct 74 GATATCTGCCCGGTGCCGGCAGGTTAA 48
>seq1190
Length=2770
Score = 78.8 bits (86), Expect = 9e-13
Identities = 71/87 (82%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 69 CGACTGTTTATTAAAAACACAGCACTCTGC--AAACACGAAAG-TGGACGTATAGGGTGT 125
|||||||||| | ||||||||||||||||| ||| | |||| | | |||||| ||||
Sbjct 323 CGACTGTTTAATTAAAACACAGCACTCTGCTGAAAGATGAAAAATCTAAGTATAGAGTGT 382
Query 126 GACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| |||||||||||||| |||||||
Sbjct 383 GATATCTGCCCGGTGCCGGCAGGTTAA 409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476790327814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |