Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15] 2,094 sequences; 34,423,103 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1115 89.7 2e-15 >seq1115 Length=3323 Score = 89.7 bits (98), Expect = 2e-15 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 2978 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 3037 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| | ||| | | | | | || Sbjct 3038 CTACACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCTAAAAATAGGATATAAATT 3097 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| |||||||||| ||||| | ||| ||||||||||| ||| Sbjct 3098 TTAAGGATTGTAGTCTGAAACTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 3157 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 3158 ACCATGTCACGGTGAAT 3174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503968506240