Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15] 917 sequences; 32,918,153 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq91 464 1e-128 >seq91 Length=110763 Score = 464 bits (514), Expect = 1e-128 Identities = 292/314 (93%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||| ||| |||||| Sbjct 104668 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGCGTGGCGGGGA 104727 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 104728 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 104787 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 104788 TAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 104847 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 104848 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 104907 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 104908 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 104966 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 104967 ACGAAAGTTAGGGG 104980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191607616