Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15]
917 sequences; 32,918,153 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq91 699 0.0
>seq91
Length=110763
Score = 699 bits (774), Expect = 0.0
Identities = 562/672 (84%), Gaps = 10/672 (1%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 107438 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 107497
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107498 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 107557
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||
Sbjct 107558 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 107617
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
||||||||| |||||||||| | | || ||| || || ||| || |||||||
Sbjct 107618 GGAAGCGCTCATGACCAGACTTGGGCCCGGTGAATCATCCAGCGTTCTC-GCTGGTGCAC 107676
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
| | | | | |||||||||||||| | | | | ||| |||||| | |||||||||||
Sbjct 107677 TTTGCCGGGCCCAGGCCAGCATCAGTTTGCCCCGGGGGACAAAGGCTCTGGGAATGTGGC 107736
Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|||| ||| |||||||||||| | | ||||| | | ||||||||| |||||
Sbjct 107737 TCCCT--CGGGAGTGTTATAGCCCTCTGCGCAATGC-CCTGGGGCGGACTGAGGCCCGCG 107793
Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
| | || ||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct 107794 CATCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGG 107853
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||| | |||||||||||| |||||| |||||| | |||||||||||||||||||
Sbjct 107854 AGTCGTCCTCGTATGCGAGTGTTCGGGTGTAAAACCCCTACGCGTAATGAAAGTGAACGC 107913
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || | || ||| ||||||||||||||||||| |||||||||||||||
Sbjct 107914 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAG 107969
Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
|| ||||||| | |||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 107970 TAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCA 108029
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 108030 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGG 108089
Query 672 GTATAGGGGCGA 683
| || |||||||
Sbjct 108090 GCATGGGGGCGA 108101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079980330350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |