Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15] 917 sequences; 32,918,153 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq91 699 0.0 >seq91 Length=110763 Score = 699 bits (774), Expect = 0.0 Identities = 562/672 (84%), Gaps = 10/672 (1%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 107438 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 107497 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107498 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 107557 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||| Sbjct 107558 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 107617 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||| |||||||||| | | || ||| || || ||| || ||||||| Sbjct 107618 GGAAGCGCTCATGACCAGACTTGGGCCCGGTGAATCATCCAGCGTTCTC-GCTGGTGCAC 107676 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 | | | | | |||||||||||||| | | | | ||| |||||| | ||||||||||| Sbjct 107677 TTTGCCGGGCCCAGGCCAGCATCAGTTTGCCCCGGGGGACAAAGGCTCTGGGAATGTGGC 107736 Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 |||| ||| |||||||||||| | | ||||| | | ||||||||| ||||| Sbjct 107737 TCCCT--CGGGAGTGTTATAGCCCTCTGCGCAATGC-CCTGGGGCGGACTGAGGCCCGCG 107793 Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 | | || ||||||||||||||||||| | |||| ||||||||| |||||||||||||| Sbjct 107794 CATCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGG 107853 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||| | |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct 107854 AGTCGTCCTCGTATGCGAGTGTTCGGGTGTAAAACCCCTACGCGTAATGAAAGTGAACGC 107913 Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||| || | || ||| ||||||||||||||||||| ||||||||||||||| Sbjct 107914 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAG 107969 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || ||||||| | |||||||||||| ||||||||||||||| |||||||||||||| Sbjct 107970 TAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCA 108029 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 108030 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGG 108089 Query 672 GTATAGGGGCGA 683 | || ||||||| Sbjct 108090 GCATGGGGGCGA 108101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079980330350