Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15]
917 sequences; 32,918,153 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq193 131 4e-28
>seq193
Length=64090
Score = 131 bits (144), Expect = 4e-28
Identities = 194/271 (72%), Gaps = 8/271 (3%)
Strand=Plus/Minus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||| ||| || ||| ||||||||||| ||| | |||||||| ||||||||
Sbjct 18042 ATCTGCACTGCTATTCCAATTTCACTGGGTCAATCATAGAGACAGCTGTTGTATCGTTAC 17983
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
|||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 17982 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 17924
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGCTAACCCCA 190
|||| ||||||| || ||||||| ||| || | | | || || ||
Sbjct 17923 GTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACATCAAATAGTAGTATATTAAATTATC 17864
Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTGTTT- 248
|| |||||| |||||||||||||| |||||| |||||| | | |||| | |||
Sbjct 17863 TCTGTTAACCAGCCGGCACCGGGCAGATATCACACTCTATACTTAGATTTTTCATCTTTC 17804
Query 249 -GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||||||||||||||||| | ||||||||||
Sbjct 17803 AGCAGAGTGCTGTGTTTTAATTAAACAGTCG 17773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260788438464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |