Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15]
917 sequences; 32,918,153 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq91 300 3e-79
>seq91
Length=110763
Score = 300 bits (332), Expect = 3e-79
Identities = 190/203 (94%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 105835 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 105894
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
| || |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||
Sbjct 105895 C-TC-CCTTGGCCGGAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAG 105952
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
|||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||
Sbjct 105953 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 106012
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||||
Sbjct 106013 TGATTACGTCCCTGCCCTTTGTA 106035
Score = 150 bits (166), Expect = 3e-34
Identities = 97/106 (92%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 105316 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 105375
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105376 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 105421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947191314176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |