Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15] 917 sequences; 32,918,153 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq91 744 0.0 seq46 89.7 2e-15 >seq91 Length=110763 Score = 744 bits (824), Expect = 0.0 Identities = 469/504 (93%), Gaps = 2/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 104511 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 104452 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 104451 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 104392 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 104391 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 104332 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 104331 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCA 104272 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||||||||||||||| |||||| | ||||| ||||| Sbjct 104271 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGAGAGCCCAG-AGGGCATTGGT 104213 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 104212 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 104153 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 104152 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 104093 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 104092 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 104034 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 104033 AGACAAGCATATGACTACTGGCAG 104010 >seq46 Length=140956 Score = 89.7 bits (98), Expect = 2e-15 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 325 TCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7932 TCCGGAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 7879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510386149632