Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15]
2,512 sequences; 38,775,191 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq138 95.1 3e-17
>seq138
Length=87561
Score = 95.1 bits (104), Expect = 3e-17
Identities = 145/203 (71%), Gaps = 8/203 (4%)
Strand=Plus/Plus
Query 83 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGC 142
|||| | | | | ||| | | ||||| ||||||||||||||||||| | | |||| |||
Sbjct 17935 TGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCAC-GTTAAGGC 17993
Query 143 CGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGCTAACCCCATCAATTAA 198
|||| || ||||||| ||| || | | | || || || || ||||
Sbjct 17994 CGCCTTTAACCGGGGTTTCCGTCGACATCAAATAGTAGTATATTAAATTATCTCTGTTAA 18053
Query 199 CCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT-CGTGTTT--GCAGAGT 255
|| |||||||||||||| |||||| |||||| | | ||| | | ||| |||||||
Sbjct 18054 CCAGCCGGCACCGGGCAGATATCACACTCTATACTTAGATTTTTCATCTTTCAGCAGAGT 18113
Query 256 GCTGTGTTTTTAATAAACAGTCG 278
|||||||||| | ||||||||||
Sbjct 18114 GCTGTGTTTTAATTAAACAGTCG 18136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260768328704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |