Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15] 2,512 sequences; 38,775,191 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq138 95.1 3e-17 >seq138 Length=87561 Score = 95.1 bits (104), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 83 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGC 142 |||| | | | | ||| | | ||||| ||||||||||||||||||| | | |||| ||| Sbjct 17935 TGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCAC-GTTAAGGC 17993 Query 143 CGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGCTAACCCCATCAATTAA 198 |||| || ||||||| ||| || | | | || || || || |||| Sbjct 17994 CGCCTTTAACCGGGGTTTCCGTCGACATCAAATAGTAGTATATTAAATTATCTCTGTTAA 18053 Query 199 CCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT-CGTGTTT--GCAGAGT 255 || |||||||||||||| |||||| |||||| | | ||| | | ||| ||||||| Sbjct 18054 CCAGCCGGCACCGGGCAGATATCACACTCTATACTTAGATTTTTCATCTTTCAGCAGAGT 18113 Query 256 GCTGTGTTTTTAATAAACAGTCG 278 |||||||||| | |||||||||| Sbjct 18114 GCTGTGTTTTAATTAAACAGTCG 18136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260768328704