Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20festucae_20[genbank_20GCA_5F002163435.1_202017-06-01] 3,769 sequences; 35,655,008 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3285 342 9e-92 seq3284 174 3e-41 seq434 165 1e-38 seq3160 161 2e-37 seq2314 161 2e-37 seq1439 156 7e-36 seq892 156 7e-36 seq563 156 7e-36 seq3075 143 5e-32 seq2708 102 1e-19 seq3413 98.7 2e-18 >seq3285 Length=27627 Score = 342 bits (378), Expect = 9e-92 Identities = 200/206 (97%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 7518 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 7460 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7459 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7400 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7399 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 7340 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 7339 GAACGCTTGGCCGCCACAAGCCAGTT 7314 Score = 156 bits (172), Expect = 7e-36 Identities = 88/89 (99%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 6843 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGA 6784 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 6783 TAGGCCACACTTTCATGGTTTGTATTCAC 6755 Score = 147 bits (162), Expect = 4e-33 Identities = 157/206 (76%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | | ||| || |||| |||||||||||||| ||||| Sbjct 15902 TACTAAGCTAAATTACTATTATAGTAA-GGTTATTAGTAAGGTAAAACTAACCTATCTCA 15844 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || ||||||||| |||| ||||||| ||||||| ||| || ||| ||||||||| | Sbjct 15843 CGATAGTCTAAACCTAGCTTACGTTCCTTATTAGTAGGTAAATAATTTAACGCTTACTAA 15784 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||| ||| | || |||||| ||||||| | | |||| Sbjct 15783 ATTCTACTTTAGTATAATAGGAAAAGCTAATATTAAAGGATTAAAAAGCGATATTACTAT 15724 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||| ||| || || | |||| |||| Sbjct 15723 AAACACTTAGCCGCTATAAGCTAGTT 15698 Score = 116 bits (128), Expect = 6e-24 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||||| ||||||||||| | ||||||||||| |||| | |||||||||||||| | Sbjct 15227 ATCCCTGTAGTAACTTTTCTAGTACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 15168 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| ||||||||||||||| Sbjct 15167 TAGGCCACACTTTTATGGTTTGTATTCAC 15139 >seq3284 Length=6720 Score = 174 bits (192), Expect = 3e-41 Identities = 163/206 (79%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| |||| | || ||| || |||| |||||||||||||| ||| | Sbjct 1578 TACTAAGCTAAATTACTATTGTAGTGA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 1636 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| ||||||||||||||| || || |||| || |||||| | Sbjct 1637 TAACAGTCTAAACCTAGCTTACGTTCCCTATTAGTAAGTAAATAATCTAATGCTTACTAA 1696 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| | ||| |||| ||||||||||| |||| |||||| ||||||||| || |||| Sbjct 1697 ATTTTACTTTAGTATAATAGGAAGAGCTAACATTAAAGGATTAAAAAGCAATGTTACTAT 1756 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| ||| | | |||| |||| Sbjct 1757 AAACGCTTAGCTACTATAAGCTAGTT 1782 Score = 89.7 bits (98), Expect = 9e-16 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 2253 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 2312 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 || || | ||||| || |||| |||| || Sbjct 2313 TAAGCTATACTTTTATAGTTTATATTTAC 2341 >seq434 Length=12928 Score = 165 bits (182), Expect = 1e-38 Identities = 161/206 (78%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || | ||| || ||||||||||||||||||| ||| | Sbjct 8292 TACTAAGCTAAATTACCATTGTAGCAA-GGTTATTAGTAGGGTAAAACTAACCTATCTTA 8234 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | ||||||||| |||| | |||| ||||||| |||||| ||| || |||||| | Sbjct 8233 CAATAGTCTAAACCTAGCTTATATTCCTTATTAGTAGGTGAATAATTTAATGCTTACTAA 8174 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||||||| | || |||||| ||||||||| | |||| Sbjct 8173 ATTCTACTTTAGTATAATAGGAAGAGCTAATATTAAAGGATTAAAAAGCAATATTACTAT 8114 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| ||||| | |||| |||| Sbjct 8113 AAACGCTTAGCTGCTATAAGCTAGTT 8088 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | || ||||||||||| | Sbjct 7617 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGAGACTAAAGGATTAA 7558 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| | ||||| ||||||| ||||||| Sbjct 7557 TAGGCTATACTTTTATGGTTTATATTCAC 7529 >seq3160 Length=33358 Score = 161 bits (178), Expect = 2e-37 Identities = 160/206 (78%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||| | | ||| || |||| |||||||||||||| ||| | Sbjct 25085 TACTAAGCTAAATTACCATTATAGTAA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 25143 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| ||||||||||||||| |||||||||| || |||||| | Sbjct 25144 TAACAGTCTAAACCTAGCTTACGTTCCCTATTAGTAAGTGAACAATCTAATGCTTACTAA 25203 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||| ||| ||| | || |||||| ||||||||| | |||| Sbjct 25204 ATTCTACTTTAGTATAATAAGAAAAGCTAATATTAAAGGATTAAAAAGCAATATTACTAT 25263 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| || | | |||| |||| Sbjct 25264 AAACGCTTAGCCACTATAAGCTAGTT 25289 Score = 156 bits (172), Expect = 7e-36 Identities = 159/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| || | |||||| |||| |||||||||||||| ||| | Sbjct 13925 TACTAAGCTAAATTACTATTATAGCAA-GGTCATTAGTAAGGTAAAACTAACCTATCTTA 13983 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| || |||||||||||| || || |||| || |||||| | Sbjct 13984 TAACAGTCTAAACCTAGCTTACATTCCCTATTAGTAAGTAAATAATCTAATGCTTACTAA 14043 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| | ||| |||| ||| ||| ||| | || |||||| |||||||||||| |||| Sbjct 14044 ATTTTACTTTAGTATAATAAGAAAAGCTAATATTAAAGGATTAAAAAGCAACGTTACTAT 14103 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||| ||| ||| | | |||| |||| Sbjct 14104 AAACACTTAGCTACTATAAGCTAGTT 14129 Score = 147 bits (162), Expect = 4e-33 Identities = 157/206 (76%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | | ||| || |||| |||||||||||||| ||| | Sbjct 2906 TACTAAGCTAAATTACTATTATAGTAA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 2964 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| ||||||||||||||| ||| || |||| || ||||| | Sbjct 2965 TAATAGTCTAAACCTAGCTTACGTTCCCTATTAGTAGGTAAATAATCTAATACTTACTAA 3024 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||| ||| | || |||||| |||||| || || |||| Sbjct 3025 ATTCTACTTTAGTATAATAGGAAAAGCTAATATTAAAGGATTAAAAAGTAATATCACTAT 3084 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 || |||| ||| | | |||| |||| Sbjct 3085 AAATGCTTAGCTACTATAAGCTAGTT 3110 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 25760 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 25819 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||| || |||| |||| || Sbjct 25820 TAGGCTACACTTTTATAGTTTATATTTAC 25848 Score = 93.3 bits (102), Expect = 7e-17 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||| | | ||||||||||| | ||||||||||| |||| | |||||||||||||| | Sbjct 14600 ATCCTTATAGTAACTTTTCTAGTACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 14659 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| || |||| |||| || Sbjct 14660 TAGGCCACACTTTTATAGTTTATATTTAC 14688 Score = 89.7 bits (98), Expect = 9e-16 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||| | | ||||||||||| | ||||||||||| |||| | |||||||||||||| | Sbjct 3581 ATCCTTATAGTAACTTTTCTAGTACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 3640 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| | ||||| ||||||| |||| || Sbjct 3641 TAGGCTATACTTTTATGGTTTATATTTAC 3669 >seq2314 Length=14001 Score = 161 bits (178), Expect = 2e-37 Identities = 160/206 (78%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| || | ||| || |||| |||||||||||| | ||| | Sbjct 4893 TACTAAGCTAAATTACTATTATAGCAA-GGTTATTAGTAAGGTAAAACTAACTTATCTTA 4835 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| ||||||||||||||| || || ||| || |||||| | Sbjct 4834 TAATAGTCTAAACCTAGCTTACGTTCCCTATTAGTAAGTAAATAATTTAATGCTTACTAA 4775 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||||||| | || |||||| ||||||||| ||| |||| Sbjct 4774 ATTCTACTTTAGTATAATAGGAAGAGCTAATATTAAAGGATTAAAAAGCAATGTCACTAT 4715 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| || || | |||| |||| Sbjct 4714 AAACGCTTAGCCGCTATAAGCTAGTT 4689 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 4218 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 4159 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 || || ||||||| || |||| ||||||| Sbjct 4158 TAAGCTACACTTTTATAGTTTATATTCAC 4130 >seq1439 Length=6938 Score = 156 bits (172), Expect = 7e-36 Identities = 159/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||| |||| ||| || |||| |||||||||||||| ||| | Sbjct 1980 TACTAAGCTAAATTACCATTATAGCGA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 2038 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| ||||||||||||||| || || |||| || |||||| | Sbjct 2039 TAACAGTCTAAACCTAGCTTACGTTCCCTATTAGTAAGTAAATAATCTAATGCTTACTAA 2098 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| | ||| |||| ||| ||| ||| | || |||||| ||||||||| | |||| Sbjct 2099 ATTTTACTTTAGTATAATAAGAAAAGCTAATATTAAAGGATTAAAAAGCAATATTACTAT 2158 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 || ||| || |||| |||| |||| Sbjct 2159 AAATACTTAGCCGCCATAAGCTAGTT 2184 Score = 102 bits (112), Expect = 1e-19 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 2655 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 2714 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 || |||||||||| ||||||| |||| || Sbjct 2715 TAAGCCACACTTTTATGGTTTATATTTAC 2743 >seq892 Length=12392 Score = 156 bits (172), Expect = 7e-36 Identities = 159/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| |||| ||| || |||| |||||||||||||| ||| | Sbjct 6944 TACTAAGCTAAATTACTATTATAGCGA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 6886 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| | |||||||||||| || || |||| ||||||||| | Sbjct 6885 TAACAGTCTAAACCTAGCTTATATTCCCTATTAGTAAGTAAATAATCTAACGCTTACTAA 6826 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| | ||| |||| ||||||| ||| | || |||||| |||||| ||||| |||| Sbjct 6825 ATTTTACTTTAGTATAATAGGAAAAGCTAATATTAAAGGATTAAAAAGTAACGTTACTAT 6766 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||| ||| || || | |||| |||| Sbjct 6765 AAACACTTAGCCGCTATAAGCTAGTT 6740 Score = 107 bits (118), Expect = 3e-21 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 6269 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 6210 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| ||||||| |||| || Sbjct 6209 TAGGCCACACTTTTATGGTTTATATTTAC 6181 >seq563 Length=5536 Score = 156 bits (172), Expect = 7e-36 Identities = 159/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| || | ||| || |||| |||||||||||||| ||| | Sbjct 3033 TACTAAGCTAAATTACTATTATAGCAA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 2975 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| || |||||||||||| || || ||| || |||||| | Sbjct 2974 TAATAGTCTAAACCTAGCTTACATTCCCTATTAGTAAGTAAATAATTTAATGCTTACTAA 2915 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||| |||| ||||||| ||| | || |||||| ||||||||| || |||| Sbjct 2914 ATTCTGCTTTAGTATAATAGGAAAAGCTAATATTAAAGGATTAAAAAGCAATGTTACTAT 2855 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| || || | |||| |||| Sbjct 2854 AAACGCTTAGCCGCTATAAGCTAGTT 2829 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| | ||||||||||| |||| | |||||||||||||| | Sbjct 2358 ATCCCTATAGTAACTTTTCTAGTACCTCTAGCCTTAAATGTTAAGGGACTAAAGGATTAA 2299 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 || |||||||||| || |||| ||||||| Sbjct 2298 TAAGCCACACTTTTATAGTTTATATTCAC 2270 >seq3075 Length=22699 Score = 143 bits (158), Expect = 5e-32 Identities = 156/206 (76%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||| | | ||| || |||| |||||||||||||| ||| | Sbjct 4672 TACTAAGCTAAATTACCATTATAGTAA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 4730 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| ||||||||||||||| || || ||| || ||||| | Sbjct 4731 TAATAGTCTAAACCTAGCTTACGTTCCCTATTAGTAAGTAAATAATTTAATACTTACTAA 4790 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| | ||| |||| ||| ||| ||| | || |||||| ||||||||| | |||| Sbjct 4791 ATTTTACTTTAGTATAATAAGAAAAGCTAATATTAAAGGATTAAAAAGCAATATTACTAT 4850 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| ||| | |||||| |||| Sbjct 4851 AAACGCTTAGCTACTACAAGCTAGTT 4876 Score = 93.3 bits (102), Expect = 7e-17 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| | |||| |||||| |||| | |||||||||||||| | Sbjct 5347 ATCCCTATAGTAACTTTTCTAGTACCTTTAGCCTTAAATATTAAGGGACTAAAGGATTAA 5406 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| | ||||| ||||||| ||||||| Sbjct 5407 TAGGCTATACTTTTATGGTTTATATTCAC 5435 >seq2708 Length=20175 Score = 102 bits (112), Expect = 1e-19 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 13154 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 13213 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||| || |||| ||||||| Sbjct 13214 TAGGCTACACTTTTATAGTTTATATTCAC 13242 Score = 86.0 bits (94), Expect = 1e-14 Identities = 75/92 (82%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||| |||| ||| || |||| |||||||||||| | ||| | Sbjct 12025 TACTAAGCTAAATTACCATTATAGCGA-GGTTATTAGTAAGGTAAAACTAACTTATCTTA 12083 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 | | ||||||||| |||| |||||||||||| Sbjct 12084 TAATAGTCTAAACCTAGCTTACGTTCCCTATT 12115 >seq3413 Length=14565 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||| | ||||||||||| ||||||||||||| |||| | |||||||||||||| | Sbjct 6445 ATCCCTATAGTAACTTTTCTAGCACCTCTAGCCTTAAATATTAAGGGACTAAAGGATTAA 6386 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| | ||||| ||||||| |||| || Sbjct 6385 TAGGCTATACTTTTATGGTTTATATTTAC 6357 Score = 93.3 bits (102), Expect = 7e-17 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 || ||||||||||||||| ||| || |||| || |||||| ||| | ||| |||| | Sbjct 7047 CTTACGTTCCCTATTAGTAGGTAAATAATCTAATGCTTACTAAATATTACTTTAGTATAA 6988 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||| ||| |||| |||||| |||||| || | |||| ||||||| ||| | | Sbjct 6987 TAGGAAAAGCTAACATTAAAGGATTAAAAAGTAATATTACTATAAACGCTTAGCTACTAT 6928 Query 198 AAGCCAGTT 206 |||| |||| Sbjct 6927 AAGCTAGTT 6919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854367797664