Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20festucae_20[genbank_20GCA_5F002163435.1_202017-06-01]
3,769 sequences; 35,655,008 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3285 452 7e-125
seq892 244 2e-62
seq3768 239 9e-61
seq3160 239 9e-61
seq2314 230 4e-58
seq3075 217 3e-54
seq3413 203 6e-50
seq434 199 7e-49
seq3011 181 2e-43
seq1439 145 1e-32
seq2708 125 1e-26
>seq3285
Length=27627
Score = 452 bits (500), Expect = 7e-125
Identities = 287/309 (93%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 3078 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 3137
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3138 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3197
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | || |||||||||
Sbjct 3198 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTAC-TC-CCTTGGCCG 3255
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3256 GAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3315
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 3316 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3375
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3376 CCCTTTGTA 3384
Score = 329 bits (364), Expect = 6e-88
Identities = 257/304 (85%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| | ||||| | | ||| ||||||||||||||
Sbjct 11469 AGACCTTAACCTGCTAAATAGCCTGTATTGCTTTAGTAGTACGCTAGCTTCTTAGAGGGA 11528
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||| |||||||||||||||||||||||||||||
Sbjct 11529 CTATTAGCTTAAGCTAATAGAAGTTTAAGGTAATAACAGGTCTGTGATGCCCTTAGATGT 11588
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||||||||||||||||||| || |||| | ||||| | || ||||||| |||||
Sbjct 11589 TCTAGGCCGCACGCGCGCTACACTAACGGAGCTAGCGAGTAC-TC-CCTTGGCTAGAAGG 11646
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|||||||||||| ||||||| | | | || ||||||||||||||||||||||||||||
Sbjct 11647 CCTGGGTAATCTTATTAAACTTTATTATACTAGGGATAGAGCATTGCAATTATTGCTCTT 11706
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
||| |||||| |||||||||||| ||||| ||| ||||| |||||||||||||||||
Sbjct 11707 TAACAAGGAATCCCTAGTAAGCGCAAGTCATTAGCTTGCGTTAATTACGTCCCTGCCCTT 11766
Query 325 TGTA 328
||||
Sbjct 11767 TGTA 11770
>seq892
Length=12392
Score = 244 bits (270), Expect = 2e-62
Identities = 238/304 (78%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | | ||| ||||||||||||||
Sbjct 2494 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 2553
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| |||||||||| ||||||||| | |||| | |||||||||||| |
Sbjct 2554 CTATTAGCTTAAGCTAATGGAAGTTTAAGGCAATAATAAGTCTATAATGCCCTTAGATAT 2613
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||||||||||||| || |||| | |||| | || |||| || |||||
Sbjct 2614 TCTAGGCTACACGCGCGCTACACTAACGGAGCTAGTGAGTAC-TC-CCTTAGCTAGAAGG 2671
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| ||| | || |||||| ||||||| ||||||| |||||
Sbjct 2672 CCTAGGTAATCTTATTAAACTTTGTTATACTAGGGATAAAGCATTGTAATTATTACTCTT 2731
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| | ||| ||||| ||| |||||||
Sbjct 2732 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTGTGTTAATTACATCCTTGCCCTT 2791
Query 325 TGTA 328
||||
Sbjct 2792 TGTA 2795
>seq3768
Length=1650
Score = 239 bits (264), Expect = 9e-61
Identities = 237/304 (78%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| |||| | ||| ||||||||||||||
Sbjct 1329 AGACCTTAACCTGCTAAATAGCCTATATTACTTTAGTAATACGCTAGCTTCTTAGAGGGA 1270
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| |||||||||| ||| ||||| |||| | | |||||||||||| |
Sbjct 1269 CTATTAGCTTAAGCTAATGGAAGTTTAAGGTAATAATAGGTTTATAATGCCCTTAGATAT 1210
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||||||||||||||||||| | | ||| | |||| | || |||| || |||||
Sbjct 1209 TCTAGGCCGCACGCGCGCTACACTAATAAAGCTAGTGAGTAC-TC-CCTTAGCTAGAAGG 1152
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||||||||||||| | | || ||||||||||||| ||||||| |||||
Sbjct 1151 CCTAGGTAATCTTGTTAAACTCTATTATACTAGGGATAGAGCATTATAATTATTACTCTT 1092
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| |||||||||| || || ||| ||| |||| |||| |||||||
Sbjct 1091 TAATAAGGAATCTCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTATGTCCTTGCCCTT 1032
Query 325 TGTA 328
||||
Sbjct 1031 TGTA 1028
>seq3160
Length=33358
Score = 239 bits (264), Expect = 9e-61
Identities = 237/304 (78%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| |||||||||||| |||| | | | ||||||||||||||
Sbjct 7339 AGACCTTAACTTGCTAAATAGCCTATATTACTTTAGTAATACACTAGCTTCTTAGAGGGA 7280
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| |||||||||| ||| ||||| |||||||| |||||||||||| |
Sbjct 7279 CTATTAGCTTAAGCTAATGGAAGTTTAAGGTAATAATAGGTCTGTAATGCCCTTAGATAT 7220
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||| ||||||||||| || |||| | ||||| | || |||| || |||||
Sbjct 7219 TCTAGGCTACACACGCGCTACACTAACGGAGCTAGCGAGTAC-TC-CCTTAGCTAGAAGG 7162
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || ||||| |||||| ||||||| |||||
Sbjct 7161 CCTAGGTAATCTTATTAAACTCTATTATACTAAGGATAAAGCATTATAATTATTACTCTT 7102
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| ||||| |||||||||||||||||
Sbjct 7101 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTGCGTTAATTACGTCCCTGCCCTT 7042
Query 325 TGTA 328
| ||
Sbjct 7041 TATA 7038
Score = 208 bits (230), Expect = 1e-51
Identities = 230/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | ||||||||| ||||| | | ||| ||||||||||||||
Sbjct 18358 AGACCTTAACTTACTAAATAGCTTATATTGCTTTAGTAGTACGCTAGCTTCTTAGAGGGA 18299
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||||||||| | |||| | || ||||||||| |
Sbjct 18298 CTATTAGCTTAAGCTAATAGAAGTTTAAGGCAATAATAAGTCTATAATACCCTTAGATAT 18239
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||| || |||||||||||| || |||| | ||||| | || |||| || |||||
Sbjct 18238 TCTAGGCCACATGCGCGCTACACTAACGGAGCTAGCGAGTAC-TC-CCTTAGCTAGAAGG 18181
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || |||||| || ||| |||||||||||||
Sbjct 18180 CCTAGGTAATCTTATTAAACTCTATTATACTAGGGATAAAGTATTATAATTATTGCTCTT 18121
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| || |||| ||| |||| ||
Sbjct 18120 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATATTAATTATATCCTTGCCTTT 18061
Query 325 TGTA 328
| ||
Sbjct 18060 TATA 18057
Score = 208 bits (230), Expect = 1e-51
Identities = 230/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | ||| ||||||||||||||
Sbjct 29518 AGACCTTAACCTACTAAATAGCCTATATTACTTTAATAGTACGCTAGCTTCTTAGAGGGA 29459
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| |||||||||| ||| ||||| | |||| | |||||||||||| |
Sbjct 29458 CTATTAGCTTAAGCTAATGGAAGTTTAAGGTAATAATAAGTCTATAATGCCCTTAGATAT 29399
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| || |||||||||||| ||| ||| | ||||| | || |||| || ||||
Sbjct 29398 TCTAGGCTACATGCGCGCTACACTAACAAAGCTAGCGAGTAC-TC-CCTTAGCTAAAAGG 29341
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| |||||||| || | || ||||| |||||| ||||||| |||||
Sbjct 29340 CCTAGGTAATCTTATTAAACTCCGTTATACTAAGGATAAAGCATTATAATTATTACTCTT 29281
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| |||||||||| || || ||| || ||||| |||||||||||
Sbjct 29280 TAATAAGGAATCCCTAGTAAGCATAAGTTATTAGCTTATATTAATTACATCCCTGCCCTT 29221
Query 325 TGTA 328
| ||
Sbjct 29220 TATA 29217
>seq2314
Length=14001
Score = 230 bits (254), Expect = 4e-58
Identities = 235/304 (77%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| | |||| || | | ||||||||||||||
Sbjct 460 AGACCTTAACCTGCTAAATAGCCCGTATTACTTTAGCAGTATACTAGCTTCTTAGAGGGA 519
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || |||||| ||| |||||||||||| | || ||||||||| |
Sbjct 520 CTATTAGCTTAAGCTAATAAAAGTTTAAGGTAATAACAGGTCTATAATACCCTTAGATAT 579
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||| || |||||||||||| || |||| | |||| | || |||| || |||||
Sbjct 580 TCTAGGCCACATGCGCGCTACACTAACGGAGCTAGTGAGTAC-TC-CCTTAGCTAGAAGG 637
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | | || ||||||||||||| ||||||| |||||
Sbjct 638 CCTAGGTAATCTTATTAAACTTTATTATACTAGGGATAGAGCATTATAATTATTACTCTT 697
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| ||||| ||| |||| |||| ||| |||||||
Sbjct 698 TAATAAGGAATCCCTAGTAAGCGTAAGTCATTAGCTTACGTTAATTATATCCTTGCCCTT 757
Query 325 TGTA 328
| ||
Sbjct 758 TATA 761
Score = 230 bits (254), Expect = 4e-58
Identities = 235/304 (77%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| ||||| | | || ||||||||||||||
Sbjct 12231 AGACCTTAACCTGCTAAATAGCCTATATTGCTTTAGTAGTATGCTAGCTTCTTAGAGGGA 12290
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||| ||||| | || | | |||||||||||| |
Sbjct 12291 CTATTAGCTTAAGCTAATAGAAGTTTAAGGTAATAATAAGTTTATAATGCCCTTAGATAT 12350
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||| | ||||||||||| || |||| | |||| | || |||| || |||||
Sbjct 12351 TCTAGGCCATATACGCGCTACACTAACGGAGCTAGTGAGTAC-TC-CCTTAGCTAGAAGG 12408
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || |||||| ||||||| |||||||||||||
Sbjct 12409 CCTAGGTAATCTTATTAAACTCTATTATACTAGGGATAAAGCATTGTAATTATTGCTCTT 12468
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| ||| |||||||||||||||||
Sbjct 12469 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCCCTGCCCTT 12528
Query 325 TGTA 328
| ||
Sbjct 12529 TATA 12532
>seq3075
Length=22699
Score = 217 bits (240), Expect = 3e-54
Identities = 232/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| | ||||| | ||| | ||||||||||||
Sbjct 9123 AGACCTTAACCTACTAAATAGCCTGTATTGCTTTAGTAATACGCTAGTTTCTTAGAGGGA 9064
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||| ||||| | |||| | |||||||||||| |
Sbjct 9063 CTATTAGCTTAAGCTAATAGAAGTTTAAGGTAATAATAAGTCTATAATGCCCTTAGATAT 9004
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||||||| || |||||||| | ||||| | |||| | || |||| || |||||
Sbjct 9003 TCTAGGCCGCACACGTGCTACACTAATAGAGCTAGTGAGTAC-TC-CCTTAGCTAGAAGG 8946
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || |||||| |||||| |||||||||||||
Sbjct 8945 CCTAGGTAATCTTATTAAACTCTATTATACTAGGGATAAAGCATTATAATTATTGCTCTT 8886
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| || ||| ||||||||||| || || ||| |||| |||| ||| | |||||
Sbjct 8885 TAATAAGAAATCCCTAGTAAGCGTAAGTTATTAGCTTACGTTAATTATATCCTTACCCTT 8826
Query 325 TGTA 328
| ||
Sbjct 8825 TATA 8822
>seq3413
Length=14565
Score = 203 bits (224), Expect = 6e-50
Identities = 229/304 (75%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| ||||||||||| |||| | | | | ||||||||||||||
Sbjct 2692 AGACCTTAACTTGCTAAATAGCTTATATTACTTTAGTAGTACACTAGCTTCTTAGAGGGA 2751
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||||||||| |||||| | || ||||||||| |
Sbjct 2752 CTATTAGCTTAAGCTAATAGAAGTTTAAGGCAATAATAGGTCTATAATACCCTTAGATAT 2811
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||| ||| ||||||| | ||||| | |||| | || |||| || ||||
Sbjct 2812 TCTAGGCTACACACGCACTACACTAATAGAGCTAGTGAGTAC-TC-CCTTAGCTAAAAGG 2869
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| | || ||||| ||||||| ||||||| |||||
Sbjct 2870 CCTAGGTAATCTTATTAAACTCTGTTATACTAAGGATAAAGCATTGTAATTATTACTCTT 2929
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| |||||||||| || || ||| || ||||||||| |||||||
Sbjct 2930 TAATAAGGAATCCCTAGTAAGCATAAGTTATTAGCTTATATTAATTACGTCCTTGCCCTT 2989
Query 325 TGTA 328
| ||
Sbjct 2990 TATA 2993
>seq434
Length=12928
Score = 199 bits (220), Expect = 7e-49
Identities = 228/304 (75%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | ||||||||| | ||||| | || ||||||||||||||
Sbjct 3859 AGACCTTAACTTACTAAATAGCTTGTATTGCTTTAGTAATATGCTAGCTTCTTAGAGGGA 3918
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||||| ||||||||| |||||| | |||||||||||| |
Sbjct 3919 CTATTAGCTTAAGCTAATAGAAGTTTAAGGCAATAATAGGTCTATAATGCCCTTAGATAT 3978
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||| ||||||||||| | ||||| | | ||| | || |||| || |||||
Sbjct 3979 TCTAGGCTACACACGCGCTACACTAATAGAGCTAGCAAGTAC-TC-CCTTAGCTAGAAGG 4036
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
| ||||||||| ||||||| | | | || |||||| ||||||| ||||||| |||||
Sbjct 4037 CTTAGGTAATCTTATTAAACTTTATTATACTAGGGATAAAGCATTGTAATTATTACTCTT 4096
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| |||||||||| || || ||| || |||| ||| |||||||
Sbjct 4097 TAATAAGGAATCCCTAGTAAGCATAAGTTATTAGCTTATATTATTTACATCCTTGCCCTT 4156
Query 325 TGTA 328
| ||
Sbjct 4157 TATA 4160
>seq3011
Length=10856
Score = 181 bits (200), Expect = 2e-43
Identities = 151/182 (83%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82
|||||||||||||||||||||||| | |||| || | ||| ||||||||||||
Sbjct 6926 CGAGACCTTAACCTGCTAAATAGCTTGTATTACTTTAGCAGTACGCTAGCTTCTTAGAGG 6867
Query 83 GACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGAT 142
|||||| ||| |||| |||||||||| ||||||||||| |||||||||||||||||||
Sbjct 6866 GACTATTAGCTTAAGCTAATGGAAGTTTAAGGCAATAACAAGTCTGTGATGCCCTTAGAT 6807
Query 143 GTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA 202
|||| |||||||||||||||||||| ||||||| | ||||| | || |||| || |||
Sbjct 6806 ATTCTAGGCCGCACGCGCGCTACACTAACAGAGCTAGCGAGTAC-TC-CCTTAGCTAGAA 6749
Query 203 GG 204
||
Sbjct 6748 GG 6747
>seq1439
Length=6938
Score = 145 bits (160), Expect = 1e-32
Identities = 109/128 (85%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
|||| || ||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 6239 AAGGCCTAGGTAATCTTGTTAAACTCTGTTGTGCTAGGGATAGAGCATTGTAATTATTGC 6180
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
|||| || |||||| |||||||||||| || || ||| ||||| |||| |||||||
Sbjct 6179 TCTTTAATAAGGAATCCCTAGTAAGCGCAAGTTATTAGCTTGCGTTAATTATATCCCTGC 6120
Query 321 CCTTTGTA 328
||||| ||
Sbjct 6119 CCTTTATA 6112
>seq2708
Length=20175
Score = 125 bits (138), Expect = 1e-26
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|| ||||||||| |||| ||| ||| ||||||||||| ||| ||| | ||| | ||
Sbjct 2777 ATACCCTTAGATATTCTAGGCTACACACGCGCTACACTAACAAAGCTAGTAAGTAC-TC- 2720
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| || ||||| || ||||||||| ||||||| | | | || |||||| ||||||
Sbjct 2719 CCTTAGCTAGAAGGCCTAGGTAATCTTATTAAACTTTATTATACTAGGGATAAAGCATTA 2660
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| ||||| || |||||| |||||||||| || || ||| || |||
Sbjct 2659 TAATTATTACTCTTTAATAAGGAATCTCTAGTAAGCGTAAGTTATTAGCTTATATTAATT 2600
Query 311 ACGTCCCTGCCCTTTGTA 328
| |||||||||||| ||
Sbjct 2599 ATATCCCTGCCCTTTATA 2582
Score = 116 bits (128), Expect = 7e-24
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|| ||||||||| |||| || ||||| ||||| ||| | |||| | ||||| | ||
Sbjct 16917 ATACCCTTAGATATTCTAAGCTACACGCACGCTATACTAATGGAGCTAGCGAGTAC-TC- 16860
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| || |||| || ||||||||| ||||| ||| | | || |||||| |||||||
Sbjct 16859 CCTTAGCTAAAAGGCCTAGGTAATCTTATTAAAGTCTATTATACTAGGGATAAAGCATTG 16800
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||| || || ||| |||||||||| || || ||| ||| |||
Sbjct 16799 TAATTATTGCTCTTTAATAAGAAATCCCTAGTAAGCATAAGTTATTAGCTTATGTTAATT 16740
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||| | |||||| ||
Sbjct 16739 ATATCCTTACCCTTTATA 16722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947164300032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |