Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20festucae_20[genbank_20GCA_5F002163435.1_202017-06-01] 3,769 sequences; 35,655,008 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2656 86.0 2e-11 >seq2656 Length=328156 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| || |||||||||| | | ||||||||||||||||| ||| | || | Sbjct 124209 CAATCGTCATTCGCGAGGGAATGGCGTGTGGGTTGATGATGATGTCTGGCGTAACACCTT 124150 Query 364485 CAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||| ||||| | || | | || | | ||| |||||| || ||||||||| | Sbjct 124149 CCCGAGTAAACGGCATGTCCTCCTGTCGGTAAG-TGACACCAATAGTGCCCTTTTGCCCG 124091 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| || || ||||| ||||| Sbjct 124090 TGACGAGAGGCGAATTTGTCTCCAAT 124065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884795378246717