Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15] 1,068 sequences; 36,169,561 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq419 89.7 2e-15 >seq419 Length=20352 Score = 89.7 bits (98), Expect = 2e-15 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 14440 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 14381 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| | ||| | | | | | || Sbjct 14380 CTACACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCTAAAAATAGGATATAAATT 14321 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| |||||||||| ||||| | ||| ||||||||||| ||| Sbjct 14320 TTAAGGATTGTAGTCTGAAACTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 14261 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 14260 ACCATGTCACGGTGAAT 14244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503983937280