Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15]
1,068 sequences; 36,169,561 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq419 89.7 2e-15
>seq419
Length=20352
Score = 89.7 bits (98), Expect = 2e-15
Identities = 139/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| |||
Sbjct 14440 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 14381
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | || ||| | || | |||| |||| | ||| | | | | | ||
Sbjct 14380 CTACACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCTAAAAATAGGATATAAATT 14321
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| |||||||||| ||||| | ||| ||||||||||| |||
Sbjct 14320 TTAAGGATTGTAGTCTGAAACTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 14261
Query 471 AGCATGCTACGGTGAAT 487
| |||| |||||||||
Sbjct 14260 ACCATGTCACGGTGAAT 14244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503983937280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |