Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15]
1,068 sequences; 36,169,561 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq933 100 2e-19
seq924 100 2e-19
seq832 100 2e-19
seq812 100 2e-19
>seq933
Length=395
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 214 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 157
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 156 TAAT-CAACGCAAGCT 142
>seq924
Length=416
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 219 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 162
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 161 TAAT-CAACGCAAGCT 147
>seq832
Length=1004
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 822 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 765
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 764 TAAT-CAACGCAAGCT 750
>seq812
Length=1315
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 720 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 663
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 662 TAAT-CAACGCAAGCT 648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300796988240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |