Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15] 1,068 sequences; 36,169,561 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq4 73.4 9e-11 >seq4 Length=375045 Score = 73.4 bits (80), Expect = 9e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 294 CCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353 |||||||| |||||||||||| |||||| || |||||||| | | ||||||| Sbjct 157699 CCATTGGCTCGGATCTGCTTGGGCACGAGGTGCTGCATGGCGATATGGCGCTTCTCGAGC 157758 Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCA 393 || || ||||||||| ||||| |||||| ||||||| Sbjct 157759 GTTGTATAGCCCGGCAGGTAAATCATTTCCATGCGGTCCA 157798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158387628288