Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15] 1,068 sequences; 36,169,561 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq761 260 1e-67 seq932 78.8 1e-12 >seq761 Length=2671 Score = 260 bits (288), Expect = 1e-67 Identities = 173/191 (91%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 524 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 465 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||| Sbjct 464 CATTAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 406 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 405 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 346 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 345 TTGGATTTATT 335 >seq932 Length=398 Score = 78.8 bits (86), Expect = 1e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 141 AGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1 AGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994702720