Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq14514 223 7e-56 >seq14514 Length=344 Score = 223 bits (246), Expect = 7e-56 Identities = 218/277 (79%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 14 GGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTG 73 || |||||||||| ||||||||| ||| ||||||||||||||||| | | |||| Sbjct 277 GGAGTGAAATAGATCCTGAACCCATACGCTTACAAGCGGTCGGAGCCCTTTCGTGGGGTG 218 Query 74 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCT 133 ||||||||||||||||||||||||||||||||||| ||| | || ||| |||| || Sbjct 217 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA-CCGTTGCTGGCAAGGATAAGCACT 159 Query 134 TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG-ACGAGTTGGTGGCGCTA 192 ||||| | | ||| || ||||||||| || || |||||| ||| || | || Sbjct 158 TCAGGTGTG-GATCCGTAGCGAAAGCGAGTCTGAATAGGGCGCTATAGTCAGTAATGGTA 100 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||||||||||| ||||||||||||| | ||||| ||||| | |||||| | | ||||| Sbjct 99 GACGCGAAACCGTGTGATCTACCCATGGGCAGGATGAAGCTGTGGTAACACATAGTGGAG 40 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGAC 289 | |||||||||| |||||||||||| |||||||||| Sbjct 39 GTCCGAACCGGTTGACGTTGAAAAGTCTTCGGATGAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972445287936