Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq968 702 0.0 seq8640 224 4e-56 seq7803 224 4e-56 seq15502 212 3e-52 seq15350 197 6e-48 seq1868 196 2e-47 seq13714 188 3e-45 seq4779 179 2e-42 seq14058 161 4e-37 seq1724 141 4e-31 seq27865 138 5e-30 seq1974 123 1e-25 seq1486 118 4e-24 seq939 109 2e-21 seq10763 105 3e-20 seq1046 102 3e-19 seq482 100 1e-18 seq27041 84.2 9e-14 seq29079 77.0 1e-11 >seq968 Length=8442 Score = 702 bits (778), Expect = 0.0 Identities = 563/672 (84%), Gaps = 10/672 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 4425 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 4366 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4365 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 4306 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||| Sbjct 4305 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 4246 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCAC 251 ||||||||| |||||||||| | | || | ||| || || |||| | ||||||| Sbjct 4245 GGAAGCGCTCATGACCAGACTTGGGCCCGGTGGATCATCCAGCGTTCTCG-CTGGTGCAC 4187 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 | | | | | |||||||||||||| | | | | ||| |||||| | ||||||||||| Sbjct 4186 TTTGCCGGGCCCAGGCCAGCATCAGTTTGCCCCGGGGGACAAAGGCTCTGGGAATGTGGC 4127 Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || || ||| |||||||||||| | | ||||| | | |||||||||| |||| Sbjct 4126 TCC--TCCGGGAGTGTTATAGCCCTCTGCGCAATGC-CCTGGGGCGGACTGAGGTTCGCG 4070 Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 | | || ||||||||||||||||||| | |||| ||||||||| |||||||||||||| Sbjct 4069 CATCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGG 4010 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||| | |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct 4009 AGTCGTCCTCGTATGCGAGTGTTCGGGTGTGAAACCCCTACGCGTAATGAAAGTGAACGC 3950 Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||| || | || ||| ||||||||||||||||||| ||||||||||||||| Sbjct 3949 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAG 3894 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || ||||||| | |||||||||||| ||||||||||||||| |||||||||||||| Sbjct 3893 TAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCA 3834 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 3833 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGG 3774 Query 672 GTATAGGGGCGA 683 | || ||||||| Sbjct 3773 GCATGGGGGCGA 3762 >seq8640 Length=457 Score = 224 bits (248), Expect = 4e-56 Identities = 140/149 (94%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 149 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 90 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 30 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAG 161 |||||||||||||||||||||||| |||| Sbjct 29 GATCGAAAGATGAAAAGCACTTTGAAAAG 1 >seq7803 Length=485 Score = 224 bits (248), Expect = 4e-56 Identities = 140/149 (94%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 149 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 90 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 30 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAG 161 |||||||||||||||||||||||| |||| Sbjct 29 GATCGAAAGATGAAAAGCACTTTGAAAAG 1 >seq15502 Length=329 Score = 212 bits (234), Expect = 3e-52 Identities = 247/330 (75%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 |||||| |||||| ||||||||||||||||||||| ||||||||||||| || | | ||| Sbjct 1 GAGACCCATAGCGGACAAGTAGAGTGATCGAAAGAAGAAAAGCACTTTGAAACGCGGGTT 60 Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCT 227 ||| |||||||||||||||||||||||||||||| |||||||||| | || | | Sbjct 61 AAATAGCACGTGAAATTGTTGAAAGGGAAGCGCTCATGACCAGACTTGAAACCGGTGGAT 120 Query 228 CAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTC 287 || | || | || |||||||| | | | | |||||||||| ||| | | | Sbjct 121 CATCAAGCGTTACCGCTGGTGCACTTTGCCGGGCACAGGCCAGCACCAGTATGACCCGGG 180 Query 288 GGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC--CGGGGTGGAAT 345 ||| |||||| | |||| |||||| | | ||| | || ||| || | | ||||| Sbjct 181 GGACAAAGGCTCTCGGAACGTGGCCAC--ACAGGGCGAGTAATAACCGACCCTGCGGAAT 238 Query 346 GCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGC 405 || | | || ||||||| |||| | || ||||||||||||| ||||| || ||| Sbjct 239 GC-ACTGGGGCGGGCTGAGGTAAGCGCAGCTGCAAGGATGCTGGCGTCATGGTCGTCAGC 297 Query 406 GGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | ||||||||| |||||||||| ||||||| Sbjct 298 GACCCGTCTTGAAACACGGACCCAGGAGTC 327 >seq15350 Length=331 Score = 197 bits (218), Expect = 6e-48 Identities = 157/186 (84%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 131 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 190 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||| ||||||||||||||||| | ||||||| |||| Sbjct 191 GGAGGTATATGTCTTCTAAAGCTAAAGATTGGCCAGAGACCGATCGAGCACAAGAAGAGG 250 Query 133 GATCG-AAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAA 191 || | |||||||| |||||| ||| |||||| || || || ||| ||| |||||| Sbjct 251 GACAGAAAAGATGACAAGCACGTTGAAAAGAGGGTGGAATAGTACGGCAAAACATTGAAA 310 Query 192 GGGAAG 197 |||||| Sbjct 311 GGGAAG 316 >seq1868 Length=2737 Score = 196 bits (216), Expect = 2e-47 Identities = 380/557 (68%), Gaps = 7/557 (1%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| |||| ||| | || ||||| ||||| || | | Sbjct 2188 AAGCTTCTTTAATAAGTTAAGTAGTTTAAAAATACTACTTTAAATAAAAGGTATATATTT 2247 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || | |||| |||| | ||||| ||| || |||||| || Sbjct 2248 TCTAAAGCTAAATATTAGCTAAAGACTAATAGTATATAAGTAAAGTAATTAAAAGATAAA 2307 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||||||| ||| ||||||||| | | | ||||| || ||| |||||| ||| || Sbjct 2308 AAGCACTTTAAAAAAAGAGTTAAATAATATATAAAATTATTAAAAAGGAAGCACTTATAA 2367 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGG 266 | | |||| | ||| | | | | | || ||| | || | ||| Sbjct 2368 CTAAACTTAGGCCTAGTAAATTATCTAGTATTCTTACTAGTATACTTTACTAAGCCTAGG 2427 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 | || || || | | |||||||||| | ||| | || | || || ||| Sbjct 2428 CTAGTATTAGTTTGCCTTAGGGGATAAAGGCTTTAGAAATATAGCTTC--TCTAGGAGTG 2485 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGC 386 ||||||||| ||| ||||| | | ||||| |||| || | || ||||||| Sbjct 2486 TTATAGCCCTCTGTGCAATGCCCTAGGGC-GGACTAAGGTTTATGCATCTGCAAGGATGC 2544 Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||||||| ||| | ||| || ||||| ||||||||| ||||||| | | |||| Sbjct 2545 TGGCGTAATAGTTATTAGCAACCTGTCTTAAAACACGGACTAAGGAGTTATCCTTATATG 2604 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 | |||||| |||||| |||||| | |||||||| |||||||||| | || || | | Sbjct 2605 CAAGTGTTCGGGTGTGAAACCCTTACGCGTAATAAAAGTGAACGCAAGTAAGA--GCTTT 2662 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 || || | || |||||||||||||| ||||||||||||||||| ||||||| | Sbjct 2663 AGCGT--ATTATTAACCGATCCTGATGTTCTCGGATGGATTTGAGTAGGAGCATACGGGG 2720 Query 567 TGGGACCCGAAAGATGG 583 || ||||||||| || Sbjct 2721 CCGGCCCCGAAAGAAGG 2737 >seq13714 Length=356 Score = 188 bits (208), Expect = 3e-45 Identities = 264/362 (73%), Gaps = 10/362 (3%) Strand=Plus/Plus Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183 |||||||||||||| ||| |||||| ||||||| |||||| |||| | || || |||||| Sbjct 1 AAGTAGAGTGATCGGAAGTTGAAAATCACTTTGAAAAGAGGGTTACATAGTACATGAAAT 60 Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGAC--TTGCCCGCAGTTGCTCAACCGGCCCCTC- 240 ||||| ||||| ||||| ||||||| ||||||| || ||| || || || Sbjct 61 TGTTGCTAGGGATGCGCTCATTACCAGACTTTTGCCCG--GTGTATCAGCC-ACCGTTCT 117 Query 241 GGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCC 300 || |||||||| | | | | |||||||||||||| | | | | ||| |||||| | Sbjct 118 CGCTGGTGCACTTTGCCGGGCCCAGGCCAGCATCAGTTTGCCCCGGGGGACAAAGGCTCT 177 Query 301 GGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGAC 360 ||||||||||| || || ||| ||||| |||||| | | ||||| | | |||| Sbjct 178 GGGAATGTGGCTCC--TCCGGGAGTGTTCTAGCCCTCTGCGCAATGC-CCTGGGGCGGAC 234 Query 361 TGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG-GAA 419 |||| ||||| | || |||||||||||| || ||| | |||| |||| |||| || Sbjct 235 CGAGGGTCGCGCATCCGCAAGGATGCTGGCGGAAGGGTCATCAGCGACCCGGCTTGAGAC 294 Query 420 CACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAAT 479 |||||||||| || | | |||||||| ||| |||||| |||||| |||||| Sbjct 295 AACGGACCAAGAAGGCGTCCCCGTATGCGAGGGTTCGGGTGTGAAACCCCAAAGCGTAAG 354 Query 480 GA 481 || Sbjct 355 GA 356 >seq4779 Length=635 Score = 179 bits (198), Expect = 2e-42 Identities = 225/307 (73%), Gaps = 4/307 (1%) Strand=Plus/Minus Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 || |||||||||||||||| ||| | ||| || ||||| ||||||||| ||||||| Sbjct 587 GCAAGGATGCTGGCGTAATAGTTATTAGCAACCTGTCTTAAAACACGGACTAAGGAGTTA 528 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 | | ||||| |||||| |||||| |||||| | |||||||| |||||||||| | || Sbjct 527 TCCTTATATGCAAGTGTTCGGGTGTGAAACCCTTACGCGTAATAAAAGTGAACGCAAGTA 468 Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 || | | || || | || || ||||| |||| |||||||||||| |||| || Sbjct 467 AGA--GCTTTAGCGT--ATTATTAACTAATCCTAATGTTCTCGGATGGATTTAAGTAGGA 412 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||||| | |||| ||||| ||| |||||||| | ||| ||| |||| |||||| Sbjct 411 GCATATAGGGCTAGACCTAAAAGAAGGTAAACTATGCTTATATAAGGTAAAGCTAGAGGA 352 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||||| ||||||||| || ||||| | |||| || | |||| | |||||| Sbjct 351 AACTCTAGTGGAGGCTTATAGTAGTTCTAATATATAAATTAATTATTAAATATAGGTATA 292 Query 677 GGGGCGA 683 |||||| Sbjct 291 AGGGCGA 285 >seq14058 Length=351 Score = 161 bits (178), Expect = 4e-37 Identities = 139/172 (81%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 ||| ||||||||||||||||||| || || |||||||||| ||||||| | || Sbjct 306 GCATCATCGACCGATCCTGATGTTCGCGTATTGATTTGAGTATGAGCATACGGGGCCAGA 247 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 ||||||||| |||||||| |||||| |||| ||| ||||| || ||||||||||| | Sbjct 246 CCCGAAAGAAGGTGAACTTTGCCTGTATAGTGTGTAGCCATAGTCTTCTCTGGTGGAGTC 187 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| | |||||||| |||||||||| | || || ||| ||| Sbjct 186 TCGCAGCGGTTCTGACTTGCAAATCTATCGTCAAATATTGGCATGGGGTCGA 135 >seq1724 Length=3335 Score = 141 bits (156), Expect = 4e-31 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| |||| ||||| | |||||||| | ||||| || | | Sbjct 1788 AAGCTTCTTTAATAAGTTAAGTAGTTTAGGAATACTACTCTAAATAGAAGGTATATATTT 1847 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || |||||| |||||| | ||||| ||| || |||||| || Sbjct 1848 TCTAAAGCTAAATATTAGCTAGAGACTAATAGCGTATAAGTAAAGTAATTAAAAGATAAA 1907 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||||||| |||||| |||||| || | | ||||| || ||| ||||| |||| || Sbjct 1908 AAGCACTTTAAAAAGAGGGTTAAATAGTATATAAAATTATTAAAAAGGAAGTGCTTATAA 1967 Query 207 CCAGACTT 214 | | |||| Sbjct 1968 CTAAACTT 1975 >seq27865 Length=230 Score = 138 bits (152), Expect = 5e-30 Identities = 167/225 (74%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 ||| |||||||| | | ||| ||| |||| | ||||||||||| ||||||| | Sbjct 222 GGCAAGCATCAGTTTGCACGGGGGGACAAAGTGTCTGGGAATGTGGCTG--TTCGGGGAG 165 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384 ||||| |||| | | || || | | | |||||||||| ||||| | | |||| Sbjct 164 GGTTATGGCCCCCAGCGCAACGCCCCGGGGC-GGACTGAGGTTCGCGCAGCTGGGTGGAT 106 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||||||||||| || |||| |||||| || ||||||||||||||||| | || Sbjct 105 GCTGGCGTAATGGTCGTCAGCGACCCGTCATGCAACACGGACCAAGGAGTGGTCCTCGTA 46 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 |||| |||| |||||| | |||| | || ||||||||||||||| Sbjct 45 TGCGTGTGTACGGGTGTGAGACCCCTCCGAGTAATGAAAGTGAAC 1 >seq1974 Length=2342 Score = 123 bits (136), Expect = 1e-25 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| ||| | ||| | || ||||| |||| || || | | Sbjct 1548 AAGCTTCTTTAATAAGTTAAGTAATTTAGAAATACTACTTTAAATAGGAGATATATGTTT 1489 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || | |||| ||||| | ||||| ||| || |||||| || Sbjct 1488 TCTAAAGCTAAATATTAGCTAAAGACTAATAGCATATAAGTAAAGTAATTAAAAGATAAA 1429 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| ||||| ||| ||||||||| || | | ||| | || |||||||||||||| || Sbjct 1428 AAGTACTTTAAAAAAAGAGTTAAATAGTATATAAAAGTATTAAAAGGGAAGCGCTTATAA 1369 Query 207 CCAGACTT 214 | |||||| Sbjct 1368 CTAGACTT 1361 >seq1486 Length=4521 Score = 118 bits (130), Expect = 4e-24 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| ||| ||||| | |||||||| |||||| || | | Sbjct 4028 AAGCTTCTTTAATAAGTTAAGTAATTTAGGAATACTACTCTAAATAAGAGGTATATATTT 3969 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || ||||| |||| | ||||| ||| || ||| || || Sbjct 3968 TCTAAAGCTAAATATTAGCTAGAGATTAATAGTATATAAGTAAAGTAATTAAAAAATAAA 3909 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||||||| ||||||||||||| || | | ||||| || ||| |||| |||| || Sbjct 3908 AAGCACTTTAAAAAGAGAGTTAAATAGTATATAAAATTATTAAAATAGAAGTGCTTATAA 3849 Query 207 CCAGACTT 214 | | |||| Sbjct 3848 CTAAACTT 3841 >seq939 Length=8709 Score = 109 bits (120), Expect = 2e-21 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| |||| | ||| | || ||||| ||||| || | | Sbjct 6486 AAGCTTCTTTAATAAGTTAAGTAGTTTAGAAATACTACTTTAAATAAAAGGTATATATTT 6427 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || | |||| |||| | ||||| ||| || ||| || || Sbjct 6426 TCTAAAGCTAAATATTAGCTAAAGACTAATAGTATATAAGTAAAGTAATTAAAAAATAAA 6367 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||||||| ||| || |||||| || | | ||||| || |||||||||| ||| || Sbjct 6366 AAGCACTTTAAAAAAAGGGTTAAATAGTATATAAAATTATTAAAAGGGAAGCACTTATAA 6307 Query 207 CCAGACTT 214 | | |||| Sbjct 6306 CTAAACTT 6299 >seq10763 Length=408 Score = 105 bits (116), Expect = 3e-20 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||||||| |||| ||||||||| || |||||| | || || | | | | || || Sbjct 113 TGTAAAGCTCCGTCGAAGAGTCGAGTAGTCTGGGAACTCGGCGCTGATTTGTATGTTTAT 54 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135 | ||||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 53 GTTTTCTATAGCTAAATATTGGCCAGAGACCTATAGTGCACCAGTAGAGTGAT 1 >seq1046 Length=7630 Score = 102 bits (112), Expect = 3e-19 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 46 AGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGC 105 ||| |||| | ||| | || ||||| ||||| || | ||||||||||||||||| || Sbjct 5425 AGTAGTTTAGAAATACTACTTTAAATAAAAGGTATATATTTTCTAAAGCTAAATATTAGC 5366 Query 106 CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165 | |||| ||| | ||||| ||| || |||||| ||||||||||| ||| || | Sbjct 5365 TAAAGACTAATAATATATAAGTAAAGTAATTAAAAGATAAAAAGCACTTTAAAAAAAGGG 5306 Query 166 TTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 ||||| || | | ||||| || ||| | |||| ||| ||| |||||| Sbjct 5305 TTAAATAGTATATAAAATTATTAAAAAGAAAGCACTTATAACTAGACTT 5257 >seq482 Length=16047 Score = 100 bits (110), Expect = 1e-18 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||| ||| | ||| ||| |||| | ||| | || ||||| ||||| || | | Sbjct 3937 AAGCTTCTTTAATAAGTTAAGTAGTTTAGAAATACTACTTTAAATAAAAGGTATATATTT 3878 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| || | |||| |||| | ||||| ||| || |||||| || Sbjct 3877 TCTAAAGCTAAATATTAGCTAAAGACTAATAGTATATAAGTAAAGTAATTAAAAGATAAA 3818 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| | ||| ||| | |||||| || | | ||||| || ||| |||||||||| || Sbjct 3817 AAGTATTTTAAAAAAAAGGTTAAATAGTATATAAAATTATTAAAAAGGAAGCGCTTATAA 3758 Query 207 CCAGACTT 214 | | |||| Sbjct 3757 CTAAACTT 3750 >seq27041 Length=230 Score = 84.2 bits (92), Expect = 9e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89 ||||||||| ||||||||| | |||||||||| ||||| ||||||||||| || | |||| Sbjct 66 CTCCTTCGAAGAGTCGAGTAGGTTGGGAATGCTGCTCTCAATGGGAGGTATATGTATTCT 7 Query 90 AAAGCT 95 |||||| Sbjct 6 AAAGCT 1 >seq29079 Length=230 Score = 77.0 bits (84), Expect = 1e-11 Identities = 126/177 (71%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA--ACCAGACTTGCC 217 |||| |||||| || |||||||| ||||||||||||||||| ||| |||||||| | Sbjct 1 AGAGGGTTAAATAGTACGTGAAACTGTTGAAAGGGAAGCGC--GCATGACCAGACTCGGG 58 Query 218 CGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAG 276 | | |||| || || || ||| || |||||||| | | ||||||||||| || Sbjct 59 CCCGGTTGATCCTCCAGCGTTCTC-GCTGGTGCACTTNGNCGGGCCCAGGCCAGCATAAG 117 Query 277 CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 | | | ||| |||| | | ||| |||||| | | || ||| |||| ||||| Sbjct 118 TATGCCCCGGGGGAGAAAGTCTCTGGGCATGTGG--CTCGTCCGGGCGTGTCATAGC 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079217868650