Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq25941 120 7e-25 >seq25941 Length=233 Score = 120 bits (132), Expect = 7e-25 Identities = 121/152 (80%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 226 TGCAGGCGGGCCAGGGTGTCCTGGCGATAAAA-GCGGCTGAGTTGGGCGTACACCTGTGG 284 ||||| |||||||| | ||| || || || || ||||| ||| || ||||| |||| || Sbjct 2 TGCAGCCGGGCCAGCGGGTCTTGCCGGTAGAACGCGGC-GAGCTGCGCGTAGACCTCAGG 60 Query 285 ATAACGATTGAC-CAGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGA 343 | || | || ||| | ||||| |||||||| |||||||||||||| || || |||| Sbjct 61 A-AAGGCGTGCTGCAGCACGTCCGGTGCGCTGAAGAAGTATTCGCTGGTCACCGCGAAGA 119 Query 344 ACTCCGCCGGGTTTTCGGCGGCGTAGGGGTCG 375 | |||||||||||||| ||||||||||||||| Sbjct 120 ATTCCGCCGGGTTTTCCGCGGCGTAGGGGTCG 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097199782112