Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= AAMG01001161.1
Length=375
Score E
Sequences producing significant alignments: (Bits) Value
seq25941 120 7e-25
>seq25941
Length=233
Score = 120 bits (132), Expect = 7e-25
Identities = 121/152 (80%), Gaps = 4/152 (3%)
Strand=Plus/Plus
Query 226 TGCAGGCGGGCCAGGGTGTCCTGGCGATAAAA-GCGGCTGAGTTGGGCGTACACCTGTGG 284
||||| |||||||| | ||| || || || || ||||| ||| || ||||| |||| ||
Sbjct 2 TGCAGCCGGGCCAGCGGGTCTTGCCGGTAGAACGCGGC-GAGCTGCGCGTAGACCTCAGG 60
Query 285 ATAACGATTGAC-CAGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGA 343
| || | || ||| | ||||| |||||||| |||||||||||||| || || ||||
Sbjct 61 A-AAGGCGTGCTGCAGCACGTCCGGTGCGCTGAAGAAGTATTCGCTGGTCACCGCGAAGA 119
Query 344 ACTCCGCCGGGTTTTCGGCGGCGTAGGGGTCG 375
| |||||||||||||| |||||||||||||||
Sbjct 120 ATTCCGCCGGGTTTTCCGCGGCGTAGGGGTCG 151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1097199782112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |