Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= AAMG01001228.1
Length=576
Score E
Sequences producing significant alignments: (Bits) Value
seq25805 145 3e-32
>seq25805
Length=234
Score = 145 bits (160), Expect = 3e-32
Identities = 169/227 (74%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 346 GCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCATTACCCTGG 405
||||||| ||||||||||||| || |||||||||||||| || |||||| | | ||||
Sbjct 1 GCAACCACGTCGGCCACCTCACGCTGAACCGCCCCGCCGGGCTCAACGCCGTCAATCTGG 60
Query 406 ACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCCCACGGTGTATG 465
| ||||| ||| || | || ||| |||||||||| ||| || || | | |
Sbjct 61 AGATGGTGCGCCTGCTCGATGAGCAGTTGCGCGCCTGGGCCGCCGACCCGTCGATTCACG 120
Query 466 CCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCCTTCTGCGCGGGCGGCGATATCCGTTCCT 525
|||| || ||||||| | ||| || || || |||||||| ||||| || ||||| ||
Sbjct 121 CCGTCGTGCTGCGCGCCAACGGCGAGAAGGCGTTCTGCGCCGGCGGTGACATCCGCTCGC 180
Query 526 TGCATGACAGTTTCAAGAGCGGCGACACCCTGCACGAAGACTTCTTT 572
|| | ||||| |||||| ||||||| ||| ||||| |||| | |||
Sbjct 181 TGTACGACAGCTTCAAGCGCGGCGATACCGAGCACG-AGACCTTTTT 226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1740165252096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |