Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= AAMG01001286.1 Length=411 Score E Sequences producing significant alignments: (Bits) Value seq21506 181 3e-43 >seq21506 Length=257 Score = 181 bits (200), Expect = 3e-43 Identities = 154/189 (81%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 1 CGAGGAACGGCCCGTCATAGCCGTGGCAGAACTGCAGGACGTGGCGATCAGCCGAGCGTG 60 |||| ||||| ||||||||||| || |||||||||| || | | |||| || | Sbjct 72 CGAGAAACGGGCCGTCATAGCCATGACAGAACTGCAACACCCAGGGTTCAGACGCC---G 128 Query 61 TCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAGG 120 ||||| ||| ||||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct 129 TCATACCAATCCTTGCCGTCCGTGACCACGAGGATGTCCTCCATGATCAGGTATTGCAGG 188 Query 121 TCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACGG 180 ||||||||| |||||| || |||||| || |||||||||||||||||| ||||| ||| Sbjct 189 TCGGAGCCATAGAACAGGTTCAGCGCATCGGTCGGCGAGCAGATCATCGGCTCGCCGCGG 248 Query 181 CGGTTGAGC 189 ||||||||| Sbjct 249 CGGTTGAGC 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1212357776736