Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= AAMG01001286.1
Length=411
Score E
Sequences producing significant alignments: (Bits) Value
seq21506 181 3e-43
>seq21506
Length=257
Score = 181 bits (200), Expect = 3e-43
Identities = 154/189 (81%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 1 CGAGGAACGGCCCGTCATAGCCGTGGCAGAACTGCAGGACGTGGCGATCAGCCGAGCGTG 60
|||| ||||| ||||||||||| || |||||||||| || | | |||| || |
Sbjct 72 CGAGAAACGGGCCGTCATAGCCATGACAGAACTGCAACACCCAGGGTTCAGACGCC---G 128
Query 61 TCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAGG 120
||||| ||| ||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct 129 TCATACCAATCCTTGCCGTCCGTGACCACGAGGATGTCCTCCATGATCAGGTATTGCAGG 188
Query 121 TCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACGG 180
||||||||| |||||| || |||||| || |||||||||||||||||| ||||| |||
Sbjct 189 TCGGAGCCATAGAACAGGTTCAGCGCATCGGTCGGCGAGCAGATCATCGGCTCGCCGCGG 248
Query 181 CGGTTGAGC 189
|||||||||
Sbjct 249 CGGTTGAGC 257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1212357776736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |