Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq34400 118 2e-24
>seq34400
Length=219
Score = 118 bits (130), Expect = 2e-24
Identities = 111/139 (80%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240
||||||||| | |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 219 ATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACG 160
Query 241 GGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCAT 300
||||| |||| ||| | | |||| | |||| ||| ||||||||| | |||||
Sbjct 159 GGGATTAGCCCTTAAG-CTTCTTTGA--TCTTAGTAGAAGGCTCTGGAAAGTGCCGCCAT 103
Query 301 AGCGGGTGATAGCCCCGTA 319
|| ||||||||||||||||
Sbjct 102 AGTGGGTGATAGCCCCGTA 84
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918065123808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |