Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq968 740 0.0 seq1358 369 1e-99 seq15443 311 3e-82 seq16334 306 1e-80 seq1817 288 3e-75 seq689 288 3e-75 seq1500 273 7e-71 seq1676 255 2e-65 seq2417 232 2e-58 seq9905 212 2e-52 seq28566 165 2e-38 seq17862 159 1e-36 seq12288 145 2e-32 seq11339 100 9e-19 seq35073 87.8 5e-15 >seq968 Length=8442 Score = 740 bits (820), Expect = 0.0 Identities = 468/504 (93%), Gaps = 2/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 6855 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 6914 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6915 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 6974 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 6975 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 7034 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 7035 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCA 7094 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||||||||||||||| |||||| | |||| ||||| Sbjct 7095 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGAGAGCCCAG-GGGGCATTGGT 7153 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 7154 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 7213 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 7214 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 7273 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 7274 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 7332 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 7333 AGACAAGCATATGACTACTGGCAG 7356 >seq1358 Length=5350 Score = 369 bits (408), Expect = 1e-99 Identities = 385/503 (77%), Gaps = 2/503 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 2055 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 1996 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||| ||||||||||| |||| || |||||||| ||| | ||||| |||| Sbjct 1995 CCTAAATTAGGATTAGGTAATTTGCGTGCCTACTACCTTCCTTAGATATAGTAGCTGTTT 1936 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | | |||||| | |||||||| || || || | Sbjct 1935 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCCGTTACCTATTATAACTATATTTA 1876 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||||||| | | || |||||| |||||| |||||||| ||| ||| || | | Sbjct 1875 GCCACTACCTAAATATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACTAGTAT 1816 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| ||| ||| |||||||||| ||| || | ||| || | ||| || ||| Sbjct 1815 AAGGCTATGTAATTTAAGAAGTTATTATAAATTACTAGAGAG-CCTAAGGGGTATTAGTT 1757 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||||| |||||| ||||| || |||||||||| ||||||||||||| Sbjct 1756 TTTAATCTAATAAATACATCCCTTCTAAAGTCAGGATTTTTAGCATATATTAGCTCTAGA 1697 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | ||||| | ||||||||||||||| ||||||| |||||| || |||| || Sbjct 1696 ATTACTATAGTTATTTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 1637 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| | Sbjct 1636 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 1578 Query 482 GACAAGCATATGACTACTGGCAG 504 || ||| |||| |||||| |||| Sbjct 1577 GATAAGTATATAACTACTAGCAG 1555 >seq15443 Length=330 Score = 311 bits (344), Expect = 3e-82 Identities = 269/331 (81%), Gaps = 2/331 (1%) Strand=Plus/Minus Query 87 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146 |||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||| Sbjct 330 GCGCCTGCTGCCTTCCTTGGATGTCGTAGCCGTTTCTCAGGCTCCTTGTCCGGGGTCGAG 271 Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTG 206 | |||| | |||||| |||||| ||| || | ||| || || | |||||||||||| Sbjct 270 CTCTAACCCTCCGTTAGCCGTTGCAACCCTGTTTGGCTCTTACCCAAACATCGAAAGTTG 211 Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT 266 | |||| ||||||||||||||||||| ||||| ||||||||||||| ||| || | | Sbjct 210 AAAGGGACGAAATTTGAATGAACCATCACCGGCACAAGGCCATGCGAGTCGAGAAATATT 151 Query 267 TATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC 326 |||||||||||| || || | |||| ||||||||| ||| || ||||| |||||| Sbjct 150 TATGAATCACCAGAGAACCAAG-GGGGCATTGGTTTTTATTCTGATGAATACCTCCCTTC 92 Query 327 CGAAG-TCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 385 ||| | || || ||||||||||||||||||||||||||||||| |||||| | ||||| Sbjct 91 CGATGATCTGGATTTTTAGCATGTATTAGCTCTAGAATTACCAAGGTTATAAACTTAGTA 32 Query 386 AGGTACTATCAAATAAACGATAACTGATTTA 416 || |||||||| ||||||| |||| || || Sbjct 31 AGACACTATCAACTAAACGAAAACTTATATA 1 >seq16334 Length=318 Score = 306 bits (338), Expect = 1e-80 Identities = 254/309 (82%), Gaps = 1/309 (0%) Strand=Plus/Plus Query 11 CAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCG 70 |||||||| ||||||||||||||||||||| || |||| |||||||| ||||||| ||| Sbjct 1 CAATTACATGACCCAAAAGAGCCCTGTATCGGTGTTTACTGTCACTAACTCCCCGAATCG 60 Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 ||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||| Sbjct 61 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCATGGGATGTAGTAGCCGGTTCTCAGGCTC 120 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 | ||||||| |||| |||||| | |||||||| |||| || ||| ||||| | | Sbjct 121 CTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCAGTTGCAACAATGAGTGGCCAACACC 180 Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250 | | || ||||||| || |||| | ||||||||||||||||||| |||| |||||||||| Sbjct 181 CAAACAGCGAAAGTAGAGAGGGAAAAAATTTGAATGAACCATCGACGGCACAAGGCCATG 240 Query 251 CGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTA 310 || | | | ||||||||||||||| ||||| || || |||| ||| || || |||| Sbjct 241 CGTATAGAGATGTTATTATGAATCACTAAGGACCCACG-GGGGCTTTGATTATTAATCTT 299 Query 311 ATAAATACA 319 || ||||| Sbjct 300 TTAGATACA 308 >seq1817 Length=2933 Score = 288 bits (318), Expect = 3e-75 Identities = 364/498 (73%), Gaps = 2/498 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| || ||| |||| |||| | ||| ||||||| | | |||||||| Sbjct 958 TACTTATTCTAATTATAAAACCTAAAAAAGCCTTATATTAGTATTTTCTATTACTACCTC 1017 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||| |||||||||||||| |||| |||||||| ||| | ||||| ||| Sbjct 1018 CCTAAATTAGGATTAGGTAATTTGCGCGCTTGCTACCTTCCTTAGATATAGTAGCTATTT 1077 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||| | | || | | | || ||| | ||||||| || || || | Sbjct 1078 CTTAGGCTTCTTTTCTAGGGTTAAGCCTTAACCCTCCGTTACTTATTATAACTATATTTA 1137 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| | || |||||| ||| || |||||||| ||| ||| || | || Sbjct 1138 GCTACTACTTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGCAT 1197 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| ||| ||| |||||||||| ||| | ||||| | ||| |||||| Sbjct 1198 AAGGCTATGTAATTTAAGAAGTTATTATAAATTCTTAGAGAGCCTAGG-GGGTATTGGTT 1256 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| || |||||||||| |||||| |||| || ||||||| || |||||||| |||| Sbjct 1257 TTTAATTAAATAAATACATCCCTTCTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 1316 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| || Sbjct 1317 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 1376 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| | Sbjct 1377 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 1435 Query 482 GACAAGCATATGACTACT 499 || ||| |||| | |||| Sbjct 1436 GATAAGTATATAATTACT 1453 >seq689 Length=12080 Score = 288 bits (318), Expect = 3e-75 Identities = 364/498 (73%), Gaps = 2/498 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| ||| ||||| |||||| ||||||||| | ||| |||||||||| | |||||||| Sbjct 231 TACTTATTTTAATTATAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 290 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||| |||||||| | || | || | |||||| || | ||||| ||| Sbjct 291 CCTAAATTAGGATTAGGTAATTTACATGCTTACTACTTTCCTTAAATATAGTAGCTATTT 350 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||| | |||| | | | |||||| | ||||| || || || | Sbjct 351 CTTAGGCTTCTTCTCTAGGGTTAAGCCCTAACCCTTTATTACCTATTATAACTATATTTA 410 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| | | || |||||| ||| || |||||||| ||| ||| || | | Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGTAT 470 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| |||||||||| ||| || | ||||| | ||| || ||| Sbjct 471 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGAGAGCCTAGG-GGGTATTAGTT 529 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||||| |||||| |||| || |||||||||| ||||||||||||| Sbjct 530 TTTAATCTAATAAATACATCCCTTCTAAAGTTAGGATTTTTAGCATATATTAGCTCTAGA 589 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| || Sbjct 590 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 649 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| | Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 708 Query 482 GACAAGCATATGACTACT 499 || ||| |||| | |||| Sbjct 709 GATAAGTATATAATTACT 726 >seq1500 Length=4370 Score = 273 bits (302), Expect = 7e-71 Identities = 361/498 (72%), Gaps = 2/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||| | ||| |||||||||| | |||||||| Sbjct 4140 TACTTATTCTAATTATAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 4081 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||||| |||||||| || || | || |||||||| ||| | ||||| ||| Sbjct 4080 CCTAAATTAGGATTAGGTAATTTACGTGCTTACTACCTTCCTTAGATATAGTAGCTATTT 4021 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | |||||| | |||| || || || | Sbjct 4020 CTTAGGCTCCTTCTCTAGGGGTAAGCCCTAACCTTCTATTACTTATTATAACTATATTTA 3961 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| | | || |||||| ||| || |||||||| ||| ||| || | | Sbjct 3960 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGTAT 3901 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| |||||||||| ||| || | |||| | ||| || ||| Sbjct 3900 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGAAAGCCTAGG-GGGTATTAGTT 3842 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| | ||||| |||| || ||||||| || |||||||| |||| Sbjct 3841 TTTAATCTAATAAATATATCCCTTTTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 3782 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| || Sbjct 3781 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 3722 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||| || | || ||| ||||||||||| | Sbjct 3721 CTATTTATAGTTTTACTATATA-ATTACTTATATATAAATATACATAGCTTAATCTTTAA 3663 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 3662 GATAAGTATATAACTACT 3645 >seq1676 Length=3512 Score = 255 bits (282), Expect = 2e-65 Identities = 357/498 (72%), Gaps = 2/498 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| |||| |||||| ||||||||| | ||| |||||||||| | |||||||| Sbjct 231 TACTTATTCTAATTGTAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 290 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | ||||| |||||||| | ||| || |||||||| ||| | ||||| ||| Sbjct 291 CTTAAATTAGGATTAGGTAATTTACATACCTACTACCTTCCTTAGATATAGTAGCTATTT 350 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||| | |||| | | | |||||| | |||| || || || | Sbjct 351 CTTAGGCTTCTTCTCTAGGGTTAAGCCCTAACCCTTTATTACTTATTATAACTATATTTA 410 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| | | || |||||| |||| |||||||| ||| ||| || | | Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAGAAAAGAAATTTAAATAAACTATTACTAGTAT 470 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| |||||||||| ||| || | |||| | ||| || ||| Sbjct 471 AAGGCTATATAATTAAAGAAGTTATTATAAATTACTAGAAAGCCTA-AGGGGTATTAGTT 529 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| || ||||||||| | || ||| |||| || ||||||| || |||||||| |||| Sbjct 530 TTTAATTTAATAAATATATCCTTTCTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 589 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||| ||| ||||||| ||||||| |||||| || |||| || Sbjct 590 ATTACTATAGTTATCTAAGTAATAAAGTACTATTAAATAAATAATAACTTATATAATAAG 649 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| | Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 708 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 709 GATAAGTATATAACTACT 726 >seq2417 Length=1439 Score = 232 bits (256), Expect = 2e-58 Identities = 323/450 (72%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| ||| ||||| ||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 231 TACTTATTTTAATTATAAGACTTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 290 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | ||||| ||||||| ||||| | || | |||||| || | |||||| ||| Sbjct 291 CTTAAATTAGGATTAAGTAATTTACGCGCTTACTACTTTCCTTAAATATAGTAGCCATTT 350 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||| |||| | | | |||||| | ||||| || || || | Sbjct 351 CTTAGGCTTTTTCTCTAGGGTTAAGCCCTAACCCTTTATTACCTATTATAACTATATTTA 410 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| | | || |||||| ||| || |||||||| ||| ||| || | || Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTTAATAAACTATTACTAGCAT 470 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| ||| ||| |||||||||| ||| || | |||| | ||| || ||| Sbjct 471 AAGGCTATGTAATTTAAGAAGTTATTATAAATTACTAGAAAGCCTAGG-GGGTATTAGTT 529 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| | |||||| |||| || ||||||| || ||||||||||||| Sbjct 530 TTTAATCTAATAAATATATCCCTTCTAAAGTTAGGATTTTTAGTATATATTAGCTCTAGA 589 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | ||||| | ||| ||||||||||| ||||||| |||||| || |||| || Sbjct 590 ATTACTATAGTTATTTAAGTAATAAGGTACTATTAAATAAATAATAACTTATATAATAAG 649 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTT 451 | ||| ||||| ||| |||| ||| ||| Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTT 678 >seq9905 Length=425 Score = 212 bits (234), Expect = 2e-52 Identities = 138/152 (91%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 162 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 103 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| | | Sbjct 102 CCCCGAATCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTAGTAGTCAGT 43 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152 ||||||||| | ||||||| |||| || ||| Sbjct 42 TCTCAGGCTACTTCTCCGGGGTCGAGCCATAA 11 >seq28566 Length=230 Score = 165 bits (182), Expect = 2e-38 Identities = 171/223 (77%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203 || |||||| | ||| ||||||| | |||||| | ||| ||| || | |||| |||| Sbjct 7 GAGCCCTAAACCTCCGATACCCGTAGCAACCATGTTTAGCCGCTACCCAAACATCCAAAG 66 Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263 | ||||||| | ||| || ||||||| | || | || ||||||| ||| ||| || | Sbjct 67 TAGATAGGGAAAAAAGTTTAATGAACTACTTCCAGATCTAGGCCATACGAGTCGAGAATT 126 Query 264 TATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC 323 |||||||||||| || ||| || |||| ||||||||| ||| ||| || ||| ||| Sbjct 127 TATTATGAATCAACAGAGAG-TCCATGGGGCTTTGGTTTTTAATCGAATCAAAACATCCC 185 Query 324 TTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366 || |||||||||| || ||||| |||| ||||||||||||||| Sbjct 186 TTACGAAGTCGGGATTATTAGCGTGTAGTAGCTCTAGAATTAC 228 >seq17862 Length=300 Score = 159 bits (176), Expect = 1e-36 Identities = 134/163 (82%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATT-ACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||| ||||||| ||||||||||||||||||||||||| |||||||||| | || | Sbjct 89 GTACTCAGTCCAATTCACAAGACCCAAAAGAGCCCTGTATCGATATTTATTGTAAATAAC 148 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| |||||||||||| ||||| || | ||||| ||||||||| || |||||||| Sbjct 149 TCCCCGAATCGGGATTGGGTCATTTGAGCACACGCTGCATTCCTTGGAGGTAGTAGCCGT 208 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 | ||||| |||| || |||| || | | |||| | |||||| Sbjct 209 TACTCAGACTCCTTCACCGGGGTCAAGCACTAACACTCCGTTA 251 >seq12288 Length=380 Score = 145 bits (160), Expect = 2e-32 Identities = 115/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||| || | |||||| | ||||||||||| ||||||||| || |||||| Sbjct 215 GTACTCATTCCAATCACCAAACCCAACACAGCCCTGTATCGGTATTTATTTTCTCTACCT 274 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| |||| ||| || |||||||| ||||||||||||| | |||| ||||||| | Sbjct 275 CCCCGAAACGGGTTTGTGTTTTTTGCGCGACTGCTGCCTTCCTGGCATGTCGTAGCCGCT 334 Query 121 TCTCAGGCTCCCTCTCCG 138 |||||| ||| |||||| Sbjct 335 TCTCAGAGTCCTTCTCCG 352 >seq11339 Length=397 Score = 100 bits (110), Expect = 9e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 397 ATTGCATATACTTAGACATGCATGGCTTAATCTTTGAAACAAGCATATGACTACTGGCAG 338 >seq35073 Length=213 Score = 87.8 bits (96), Expect = 5e-15 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 |||| ||||||||||||| |||| ||| ||||||||| ||||| |||||||||||||||| Sbjct 213 TATA-ATTGCTTATACTTGGACAGGCAGGGCTTAATCGTTGAGCCAAGCATATGACTACT 155 Query 500 GGCAG 504 ||||| Sbjct 154 GGCAG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509849262848