Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq968 740 0.0
seq1358 369 1e-99
seq15443 311 3e-82
seq16334 306 1e-80
seq1817 288 3e-75
seq689 288 3e-75
seq1500 273 7e-71
seq1676 255 2e-65
seq2417 232 2e-58
seq9905 212 2e-52
seq28566 165 2e-38
seq17862 159 1e-36
seq12288 145 2e-32
seq11339 100 9e-19
seq35073 87.8 5e-15
>seq968
Length=8442
Score = 740 bits (820), Expect = 0.0
Identities = 468/504 (93%), Gaps = 2/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 6855 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 6914
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 6915 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 6974
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 6975 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 7034
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 7035 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCA 7094
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||||||||||||||| |||||| | |||| |||||
Sbjct 7095 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGAGAGCCCAG-GGGGCATTGGT 7153
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 7154 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 7213
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 7214 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 7273
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 7274 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 7332
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 7333 AGACAAGCATATGACTACTGGCAG 7356
>seq1358
Length=5350
Score = 369 bits (408), Expect = 1e-99
Identities = 385/503 (77%), Gaps = 2/503 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | ||||||||
Sbjct 2055 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 1996
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | ||||| ||||||||||| |||| || |||||||| ||| | ||||| ||||
Sbjct 1995 CCTAAATTAGGATTAGGTAATTTGCGTGCCTACTACCTTCCTTAGATATAGTAGCTGTTT 1936
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | | |||||| | |||||||| || || || |
Sbjct 1935 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCCGTTACCTATTATAACTATATTTA 1876
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
||||||| | | || |||||| |||||| |||||||| ||| ||| || | |
Sbjct 1875 GCCACTACCTAAATATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACTAGTAT 1816
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| ||| ||| |||||||||| ||| || | ||| || | ||| || |||
Sbjct 1815 AAGGCTATGTAATTTAAGAAGTTATTATAAATTACTAGAGAG-CCTAAGGGGTATTAGTT 1757
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||||| |||||| ||||| || |||||||||| |||||||||||||
Sbjct 1756 TTTAATCTAATAAATACATCCCTTCTAAAGTCAGGATTTTTAGCATATATTAGCTCTAGA 1697
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | ||||| | ||||||||||||||| ||||||| |||||| || |||| ||
Sbjct 1696 ATTACTATAGTTATTTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 1637
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| |
Sbjct 1636 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 1578
Query 482 GACAAGCATATGACTACTGGCAG 504
|| ||| |||| |||||| ||||
Sbjct 1577 GATAAGTATATAACTACTAGCAG 1555
>seq15443
Length=330
Score = 311 bits (344), Expect = 3e-82
Identities = 269/331 (81%), Gaps = 2/331 (1%)
Strand=Plus/Minus
Query 87 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146
|||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||
Sbjct 330 GCGCCTGCTGCCTTCCTTGGATGTCGTAGCCGTTTCTCAGGCTCCTTGTCCGGGGTCGAG 271
Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTG 206
| |||| | |||||| |||||| ||| || | ||| || || | ||||||||||||
Sbjct 270 CTCTAACCCTCCGTTAGCCGTTGCAACCCTGTTTGGCTCTTACCCAAACATCGAAAGTTG 211
Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT 266
| |||| ||||||||||||||||||| ||||| ||||||||||||| ||| || | |
Sbjct 210 AAAGGGACGAAATTTGAATGAACCATCACCGGCACAAGGCCATGCGAGTCGAGAAATATT 151
Query 267 TATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC 326
|||||||||||| || || | |||| ||||||||| ||| || ||||| ||||||
Sbjct 150 TATGAATCACCAGAGAACCAAG-GGGGCATTGGTTTTTATTCTGATGAATACCTCCCTTC 92
Query 327 CGAAG-TCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 385
||| | || || ||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct 91 CGATGATCTGGATTTTTAGCATGTATTAGCTCTAGAATTACCAAGGTTATAAACTTAGTA 32
Query 386 AGGTACTATCAAATAAACGATAACTGATTTA 416
|| |||||||| ||||||| |||| || ||
Sbjct 31 AGACACTATCAACTAAACGAAAACTTATATA 1
>seq16334
Length=318
Score = 306 bits (338), Expect = 1e-80
Identities = 254/309 (82%), Gaps = 1/309 (0%)
Strand=Plus/Plus
Query 11 CAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCG 70
|||||||| ||||||||||||||||||||| || |||| |||||||| ||||||| |||
Sbjct 1 CAATTACATGACCCAAAAGAGCCCTGTATCGGTGTTTACTGTCACTAACTCCCCGAATCG 60
Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130
||||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||
Sbjct 61 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCATGGGATGTAGTAGCCGGTTCTCAGGCTC 120
Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190
| ||||||| |||| |||||| | |||||||| |||| || ||| ||||| | |
Sbjct 121 CTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCAGTTGCAACAATGAGTGGCCAACACC 180
Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250
| | || ||||||| || |||| | ||||||||||||||||||| |||| ||||||||||
Sbjct 181 CAAACAGCGAAAGTAGAGAGGGAAAAAATTTGAATGAACCATCGACGGCACAAGGCCATG 240
Query 251 CGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTA 310
|| | | | ||||||||||||||| ||||| || || |||| ||| || || ||||
Sbjct 241 CGTATAGAGATGTTATTATGAATCACTAAGGACCCACG-GGGGCTTTGATTATTAATCTT 299
Query 311 ATAAATACA 319
|| |||||
Sbjct 300 TTAGATACA 308
>seq1817
Length=2933
Score = 288 bits (318), Expect = 3e-75
Identities = 364/498 (73%), Gaps = 2/498 (0%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| || ||| |||| |||| | ||| ||||||| | | ||||||||
Sbjct 958 TACTTATTCTAATTATAAAACCTAAAAAAGCCTTATATTAGTATTTTCTATTACTACCTC 1017
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | ||||| |||||||||||||| |||| |||||||| ||| | ||||| |||
Sbjct 1018 CCTAAATTAGGATTAGGTAATTTGCGCGCTTGCTACCTTCCTTAGATATAGTAGCTATTT 1077
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||| | | || | | | || ||| | ||||||| || || || |
Sbjct 1078 CTTAGGCTTCTTTTCTAGGGTTAAGCCTTAACCCTCCGTTACTTATTATAACTATATTTA 1137
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||| | || |||||| ||| || |||||||| ||| ||| || | ||
Sbjct 1138 GCTACTACTTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGCAT 1197
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| ||| ||| |||||||||| ||| | ||||| | ||| ||||||
Sbjct 1198 AAGGCTATGTAATTTAAGAAGTTATTATAAATTCTTAGAGAGCCTAGG-GGGTATTGGTT 1256
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| || |||||||||| |||||| |||| || ||||||| || |||||||| ||||
Sbjct 1257 TTTAATTAAATAAATACATCCCTTCTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 1316
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| ||
Sbjct 1317 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 1376
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| |
Sbjct 1377 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 1435
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| | ||||
Sbjct 1436 GATAAGTATATAATTACT 1453
>seq689
Length=12080
Score = 288 bits (318), Expect = 3e-75
Identities = 364/498 (73%), Gaps = 2/498 (0%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| ||| ||||| |||||| ||||||||| | ||| |||||||||| | ||||||||
Sbjct 231 TACTTATTTTAATTATAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 290
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | ||||| |||||||| | || | || | |||||| || | ||||| |||
Sbjct 291 CCTAAATTAGGATTAGGTAATTTACATGCTTACTACTTTCCTTAAATATAGTAGCTATTT 350
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||| | |||| | | | |||||| | ||||| || || || |
Sbjct 351 CTTAGGCTTCTTCTCTAGGGTTAAGCCCTAACCCTTTATTACCTATTATAACTATATTTA 410
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||| | | || |||||| ||| || |||||||| ||| ||| || | |
Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGTAT 470
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||| |||||||||| ||| || | ||||| | ||| || |||
Sbjct 471 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGAGAGCCTAGG-GGGTATTAGTT 529
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||||| |||||| |||| || |||||||||| |||||||||||||
Sbjct 530 TTTAATCTAATAAATACATCCCTTCTAAAGTTAGGATTTTTAGCATATATTAGCTCTAGA 589
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| ||
Sbjct 590 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 649
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| |
Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 708
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| | ||||
Sbjct 709 GATAAGTATATAATTACT 726
>seq1500
Length=4370
Score = 273 bits (302), Expect = 7e-71
Identities = 361/498 (72%), Gaps = 2/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||| | ||| |||||||||| | ||||||||
Sbjct 4140 TACTTATTCTAATTATAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 4081
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | ||||| |||||||| || || | || |||||||| ||| | ||||| |||
Sbjct 4080 CCTAAATTAGGATTAGGTAATTTACGTGCTTACTACCTTCCTTAGATATAGTAGCTATTT 4021
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | |||||| | |||| || || || |
Sbjct 4020 CTTAGGCTCCTTCTCTAGGGGTAAGCCCTAACCTTCTATTACTTATTATAACTATATTTA 3961
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||| | | || |||||| ||| || |||||||| ||| ||| || | |
Sbjct 3960 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTAAATAAACTATTACTAGTAT 3901
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||| |||||||||| ||| || | |||| | ||| || |||
Sbjct 3900 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGAAAGCCTAGG-GGGTATTAGTT 3842
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| | ||||| |||| || ||||||| || |||||||| ||||
Sbjct 3841 TTTAATCTAATAAATATATCCCTTTTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 3782
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| ||
Sbjct 3781 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 3722
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||| || | || ||| ||||||||||| |
Sbjct 3721 CTATTTATAGTTTTACTATATA-ATTACTTATATATAAATATACATAGCTTAATCTTTAA 3663
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 3662 GATAAGTATATAACTACT 3645
>seq1676
Length=3512
Score = 255 bits (282), Expect = 2e-65
Identities = 357/498 (72%), Gaps = 2/498 (0%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| |||| |||||| ||||||||| | ||| |||||||||| | ||||||||
Sbjct 231 TACTTATTCTAATTGTAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 290
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
| | ||||| |||||||| | ||| || |||||||| ||| | ||||| |||
Sbjct 291 CTTAAATTAGGATTAGGTAATTTACATACCTACTACCTTCCTTAGATATAGTAGCTATTT 350
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||| | |||| | | | |||||| | |||| || || || |
Sbjct 351 CTTAGGCTTCTTCTCTAGGGTTAAGCCCTAACCCTTTATTACTTATTATAACTATATTTA 410
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||| | | || |||||| |||| |||||||| ||| ||| || | |
Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAGAAAAGAAATTTAAATAAACTATTACTAGTAT 470
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||| |||||||||| ||| || | |||| | ||| || |||
Sbjct 471 AAGGCTATATAATTAAAGAAGTTATTATAAATTACTAGAAAGCCTA-AGGGGTATTAGTT 529
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| || ||||||||| | || ||| |||| || ||||||| || |||||||| ||||
Sbjct 530 TTTAATTTAATAAATATATCCTTTCTAAAGTTAGGATTTTTAGTATATATTAGCTTTAGA 589
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||| ||| ||||||| ||||||| |||||| || |||| ||
Sbjct 590 ATTACTATAGTTATCTAAGTAATAAAGTACTATTAAATAAATAATAACTTATATAATAAG 649
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||| | || ||| ||||||||||| |
Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAAATATACATAGCTTAATCTTTAA 708
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 709 GATAAGTATATAACTACT 726
>seq2417
Length=1439
Score = 232 bits (256), Expect = 2e-58
Identities = 323/450 (72%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| ||| ||||| ||||| ||||||||||| ||| |||||||||| | ||||||||
Sbjct 231 TACTTATTTTAATTATAAGACTTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 290
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
| | ||||| ||||||| ||||| | || | |||||| || | |||||| |||
Sbjct 291 CTTAAATTAGGATTAAGTAATTTACGCGCTTACTACTTTCCTTAAATATAGTAGCCATTT 350
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||| |||| | | | |||||| | ||||| || || || |
Sbjct 351 CTTAGGCTTTTTCTCTAGGGTTAAGCCCTAACCCTTTATTACCTATTATAACTATATTTA 410
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||| | | || |||||| ||| || |||||||| ||| ||| || | ||
Sbjct 411 GCTACTACCTAAATATTAAAAGTTAATAAGGAAGAAATTTTAATAAACTATTACTAGCAT 470
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| ||| ||| |||||||||| ||| || | |||| | ||| || |||
Sbjct 471 AAGGCTATGTAATTTAAGAAGTTATTATAAATTACTAGAAAGCCTAGG-GGGTATTAGTT 529
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| | |||||| |||| || ||||||| || |||||||||||||
Sbjct 530 TTTAATCTAATAAATATATCCCTTCTAAAGTTAGGATTTTTAGTATATATTAGCTCTAGA 589
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | ||||| | ||| ||||||||||| ||||||| |||||| || |||| ||
Sbjct 590 ATTACTATAGTTATTTAAGTAATAAGGTACTATTAAATAAATAATAACTTATATAATAAG 649
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTT 451
| ||| ||||| ||| |||| ||| |||
Sbjct 650 CTATTTATAGTTTTACTATATA-ATTACTT 678
>seq9905
Length=425
Score = 212 bits (234), Expect = 2e-52
Identities = 138/152 (91%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 162 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 103
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| | |
Sbjct 102 CCCCGAATCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTAGTAGTCAGT 43
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152
||||||||| | ||||||| |||| || |||
Sbjct 42 TCTCAGGCTACTTCTCCGGGGTCGAGCCATAA 11
>seq28566
Length=230
Score = 165 bits (182), Expect = 2e-38
Identities = 171/223 (77%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|| |||||| | ||| ||||||| | |||||| | ||| ||| || | |||| ||||
Sbjct 7 GAGCCCTAAACCTCCGATACCCGTAGCAACCATGTTTAGCCGCTACCCAAACATCCAAAG 66
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263
| ||||||| | ||| || ||||||| | || | || ||||||| ||| ||| || |
Sbjct 67 TAGATAGGGAAAAAAGTTTAATGAACTACTTCCAGATCTAGGCCATACGAGTCGAGAATT 126
Query 264 TATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC 323
|||||||||||| || ||| || |||| ||||||||| ||| ||| || ||| |||
Sbjct 127 TATTATGAATCAACAGAGAG-TCCATGGGGCTTTGGTTTTTAATCGAATCAAAACATCCC 185
Query 324 TTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366
|| |||||||||| || ||||| |||| |||||||||||||||
Sbjct 186 TTACGAAGTCGGGATTATTAGCGTGTAGTAGCTCTAGAATTAC 228
>seq17862
Length=300
Score = 159 bits (176), Expect = 1e-36
Identities = 134/163 (82%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATT-ACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||| ||||||| ||||||||||||||||||||||||| |||||||||| | || |
Sbjct 89 GTACTCAGTCCAATTCACAAGACCCAAAAGAGCCCTGTATCGATATTTATTGTAAATAAC 148
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| |||||||||||| ||||| || | ||||| ||||||||| || ||||||||
Sbjct 149 TCCCCGAATCGGGATTGGGTCATTTGAGCACACGCTGCATTCCTTGGAGGTAGTAGCCGT 208
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
| ||||| |||| || |||| || | | |||| | ||||||
Sbjct 209 TACTCAGACTCCTTCACCGGGGTCAAGCACTAACACTCCGTTA 251
>seq12288
Length=380
Score = 145 bits (160), Expect = 2e-32
Identities = 115/138 (83%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||| || | |||||| | ||||||||||| ||||||||| || ||||||
Sbjct 215 GTACTCATTCCAATCACCAAACCCAACACAGCCCTGTATCGGTATTTATTTTCTCTACCT 274
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||| ||| || |||||||| ||||||||||||| | |||| ||||||| |
Sbjct 275 CCCCGAAACGGGTTTGTGTTTTTTGCGCGACTGCTGCCTTCCTGGCATGTCGTAGCCGCT 334
Query 121 TCTCAGGCTCCCTCTCCG 138
|||||| ||| ||||||
Sbjct 335 TCTCAGAGTCCTTCTCCG 352
>seq11339
Length=397
Score = 100 bits (110), Expect = 9e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 397 ATTGCATATACTTAGACATGCATGGCTTAATCTTTGAAACAAGCATATGACTACTGGCAG 338
>seq35073
Length=213
Score = 87.8 bits (96), Expect = 5e-15
Identities = 59/65 (91%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499
|||| ||||||||||||| |||| ||| ||||||||| ||||| ||||||||||||||||
Sbjct 213 TATA-ATTGCTTATACTTGGACAGGCAGGGCTTAATCGTTGAGCCAAGCATATGACTACT 155
Query 500 GGCAG 504
|||||
Sbjct 154 GGCAG 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509849262848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |