Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq184 89.7 2e-12
>seq184
Length=26130
Score = 89.7 bits (98), Expect = 2e-12
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||| || |||||||||| | | ||||||||||||||||| ||| | || |
Sbjct 24409 CAATCGTCATTCGCGAGGGAATGGCGTGTGGGTTGATGATGATGTCTGGCGTGACACCTT 24350
Query 364485 CAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
| ||||| ||||| || || | || | | ||| |||||| || ||||||||| |
Sbjct 24349 CCCTAGTAAACGGCATGTCCTCTTGTCGGTAAG-TGACACCAATAGTGCCCTTTTGCCCG 24291
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| ||||| || |||||||| |||||
Sbjct 24290 TGACGAGAGGCGAACTTGTCTCCAAT 24265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884005814648459
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |