Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30]
23,102 sequences; 53,344,113 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq46 75.2 1e-11
>seq46
Length=85326
Score = 75.2 bits (82), Expect = 1e-11
Identities = 70/87 (80%), Gaps = 3/87 (3%)
Strand=Plus/Minus
Query 69 CGACTGTTTATTAAAAACACAGCACTCTGC--AAACACG-AAAGTGGACGTATAGGGTGT 125
|||||||||| | ||||||||||||||||| ||| | | ||| | | |||||| ||||
Sbjct 21301 CGACTGTTTAATTAAAACACAGCACTCTGCTGAAAGATGAAAAATCTAAGTATAGAGTGT 21242
Query 126 GACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| |||||||||||||| ||||||
Sbjct 21241 GATATCTGCCCGGTGCCGGCTGGTTAA 21215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476693291862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |