Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30]
23,102 sequences; 53,344,113 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq387 100 2e-19
>seq387
Length=34204
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 5164 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5221
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 5222 TAAT-CAACGCAAGCT 5236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300734852360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |