Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30]
23,102 sequences; 53,344,113 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq686 73.4 9e-11
>seq686
Length=23226
Score = 73.4 bits (80), Expect = 9e-11
Identities = 76/100 (76%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 294 CCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353
|||||||| |||||||||||| |||||| || |||||||| | | |||||||
Sbjct 1101 CCATTGGCTCGGATCTGCTTGGGCACGAGGTGCTGCATGGCGATATGGCGCTTCTCGAGC 1160
Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCA 393
|| || ||||||||| ||||| |||||| |||||||
Sbjct 1161 GTTGTATAGCCCGGCAGGTAAATCATTTCCATGCGGTCCA 1200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158132386432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |