Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 944 0.0 >seq6 Length=1473139 Score = 944 bits (1046), Expect = 0.0 Identities = 624/686 (91%), Gaps = 5/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTAG-CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || | |||| |||||| |||| |||||||||||||||||||||||||||| Sbjct 832011 TACGTGGTCGCTAGCCTTTACCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 831952 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 831951 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 831892 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 831891 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 831832 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| Sbjct 831831 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTCATCCGGGTTTC 831772 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 ||||||||||||||| ||| |||||||||||||| | ||||||| ||||||||| | Sbjct 831771 TACCCGGTGCACTCTTCTACGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 831712 Query 300 CGGGAATGTGGCCCCCTTCGGGGGG-TGTTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357 | | |||| | |||||||||| | | |||||| || | || |||| || ||||| Sbjct 831711 CTGTCATGTACCTCCCTTCGGGGAGATCTTATAGG--GGAGACGACATGCAACCAGCCTG 831654 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct 831653 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 831594 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 831593 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTA 831534 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 831533 ATGAAAGTGAACGGAGGTGGGAACCTTTCGGGGTGCACCATCGACCGATCCTGATGTCTT 831474 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 831473 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 831414 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 831413 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 831354 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| |||||||||| Sbjct 831353 ATCGTCAAATTTGGGCATAGGGGCGA 831328 Score = 944 bits (1046), Expect = 0.0 Identities = 624/686 (91%), Gaps = 5/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTAG-CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || | |||| |||||| |||| |||||||||||||||||||||||||||| Sbjct 840293 TACGTGGTCGCTAGCCTTTACCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 840234 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 840233 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 840174 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840173 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 840114 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| Sbjct 840113 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTCATCCGGGTTTC 840054 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 ||||||||||||||| ||| |||||||||||||| | ||||||| ||||||||| | Sbjct 840053 TACCCGGTGCACTCTTCTACGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 839994 Query 300 CGGGAATGTGGCCCCCTTCGGGGGG-TGTTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357 | | |||| | |||||||||| | | |||||| || | || |||| || ||||| Sbjct 839993 CTGTCATGTACCTCCCTTCGGGGAGATCTTATAGG--GGAGACGACATGCAACCAGCCTG 839936 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct 839935 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 839876 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 839875 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTA 839816 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 839815 ATGAAAGTGAACGGAGGTGGGAACCTTTCGGGGTGCACCATCGACCGATCCTGATGTCTT 839756 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 839755 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 839696 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 839695 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 839636 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| |||||||||| Sbjct 839635 ATCGTCAAATTTGGGCATAGGGGCGA 839610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995130850