Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq37 84.2 3e-14 >seq37 Length=60243 Score = 84.2 bits (92), Expect = 3e-14 Identities = 159/227 (70%), Gaps = 13/227 (6%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAG---GCGTCAGTCCGTATACATCGACTTACCGTCTT-CG 57 ||| || |||||| |||||| ||| || || ||||||| || |||| |||| || Sbjct 10656 TTAACCAGCCATCATTGGGCAGATAGCG-CACTC--TATACATTGATTTACA-TCTTACG 10601 Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117 || | ||||||||| | |||||||||| | | ||| | || || | || Sbjct 10600 CAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC--- 10544 Query 118 TCAACACGTCGT--TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 | ||| | | ||| ||| | |||||| |||| |||| |||||||| | ||||||| Sbjct 10543 TAAACTGATATTAATCAGCAGGAATGGCACACCTTTTCCCTCAGTTACGGTGTCATTTTG 10484 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTAC 222 |||| |||||||| | ||| | | |||||||| ||||||||||| Sbjct 10483 CCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 10437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694398472971