Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq37 104 6e-20 >seq37 Length=60243 Score = 104 bits (114), Expect = 6e-20 Identities = 273/414 (66%), Gaps = 17/414 (4%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||||| Sbjct 10843 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTTAG 10784 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| |||| Sbjct 10783 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTTATA 10724 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-------GTTAGCTAACC 187 | || ||||||| || | |||| ||| |||| | || | || | |||| Sbjct 10723 GATAAGGCCGCCATTCAATGGGGGTTCCTTCAAAACCTAAACTATATTAGTCATCTAAGT 10664 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 10663 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 10604 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCA 304 ||| ||||||||||||| | ||||||||| ||| | | | ||| | | | Sbjct 10603 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 10544 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 | | || | | || ||| | | ||| |||||| |||| |||||||||| Sbjct 10543 TAAACTGA--TATTAA-----TCAGCAGGAATGGCACACCTTTTCCCTCAGTTACGGTGT 10491 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | ||||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 10490 CATTTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 10437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797137984