Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq37 86.0 1e-14 >seq37 Length=60243 Score = 86.0 bits (94), Expect = 1e-14 Identities = 259/391 (66%), Gaps = 48/391 (12%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 10843 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 10788 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||| | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 10787 TTAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 10728 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT---CGAT-----TGCTC 176 ||||| || ||||||| || | ||||| || |||| | | | || | || Sbjct 10727 TATAGATAAGGCCGCCATTCAATGGGGGTT-CCTTCAAAACCTAAACTATATTAGTCATC 10669 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||||| | | Sbjct 10668 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 10612 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-T 284 | | |||| ||| | ||||||||| |||||||||| || | ||| | Sbjct 10611 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGT 10554 Query 285 CTCTGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGG 330 ||| | ||| | ||| || ||||| |||| ||||| |||||||| Sbjct 10553 CTCCTCTTCCTAAACTGATATTAATCAGCAGGAATGGCACACCTTTTCCCTCAGTTACGG 10494 Query 331 GGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 |||||||||||||||||||||| || ||| Sbjct 10493 TGTCATTTTGCCGAGTTCCTTAATGATTGTT 10463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397588352