Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq37 82.4 2e-13 >seq37 Length=60243 Score = 82.4 bits (90), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 2135 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATGTGCC 2194 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||||| || | | |||| | ||| |||||| |||| | ||| | Sbjct 2195 TTTACAAAGGGATGCAATAATGCGAATTGGAGCTAATCCCCTAAAAGAGGATAAAGTATG 2254 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT-AG--ATCAG 472 |||||||||||| || |||||| ||||| ||||| ||||||||||| || |||| Sbjct 2255 GATTGTAGTCTGAAATTCGACTGCATGAAAAAGGAATTACTAGTAATCGTGAGTAATCA- 2313 Query 473 CATGCTACGGTGAAT 487 ||| ||||||||| Sbjct 2314 CAT--CACGGTGAAT 2326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503996585920