Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq6 288 1e-75 seq4 107 2e-21 >seq6 Length=1473139 Score = 288 bits (318), Expect = 1e-75 Identities = 179/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 833763 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 833704 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 833703 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG- 833645 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 833644 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 833585 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 833584 TTGGATTTATT 833574 Score = 288 bits (318), Expect = 1e-75 Identities = 179/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 842045 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 841986 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 841985 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG- 841927 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 841926 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 841867 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 841866 TTGGATTTATT 841856 >seq4 Length=1737036 Score = 107 bits (118), Expect = 2e-21 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAA---TTAGAGCGTTCAAAGCAGGCCTTTGCTCGA 57 |||||||||||| |||||||| ||||| |||||| || ||||||||||||||||||| Sbjct 964833 GGAACCAGGACTCTTACTTTGGAAAAAAAGTTAGAGTGTCCAAAGCAGGCCTTTGCTCGG 964892 Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCG 92 |||| | | |||||| || ||||||||||||| || Sbjct 964893 ATACGTCAGCATGGACTAGTAGAATAGGACGTTCG 964927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998874080