Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6 286 6e-75 seq13 107 3e-21 >seq6 Length=1473139 Score = 286 bits (316), Expect = 6e-75 Identities = 234/279 (84%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 829246 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 829189 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829188 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 829129 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||||||| ||||||||||||||||| ||| ||||| ||| Sbjct 829128 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTTTGGCCCAGAA 829073 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| ||| |||| || | | | ||| ||| | || ||| || | ||||| Sbjct 829072 CCTTACCAGATCGGCGTTGGTGGCCTCATTGAAATTGGGGTCACT-AGCCGGTGTATTGC 829014 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 829013 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 828975 Score = 286 bits (316), Expect = 6e-75 Identities = 234/279 (84%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 837528 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 837471 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837470 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 837411 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||||||| ||||||||||||||||| ||| ||||| ||| Sbjct 837410 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTTTGGCCCAGAA 837355 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| ||| |||| || | | | ||| ||| | || ||| || | ||||| Sbjct 837354 CCTTACCAGATCGGCGTTGGTGGCCTCATTGAAATTGGGGTCACT-AGCCGGTGTATTGC 837296 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 837295 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 837257 >seq13 Length=1009921 Score = 107 bits (118), Expect = 3e-21 Identities = 110/138 (80%), Gaps = 8/138 (6%) Strand=Plus/Minus Query 40 GCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCC 99 |||||||||||| |||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct 639387 GCGGCTGTCTGAACAGGCATTGCCGCGAAGCTACCATCTGCAGGATTATAACTAATTGCC 639328 Query 100 TCTAAGTCAGA-ATCCATGCCAGAACGGGGTGATTCTCT-CCTGCACATCGTAGTCGGAT 157 ||||| || | | || |||||| |||||| |||| ||| |||||| | | ||||| Sbjct 639327 TCTAAACCAAAGACCCGTGCCAGTACGGGGCGATT-TCTGCCTGCATA----GGGCGGAT 639273 Query 158 ACGAATAGG-CTTCGGCC 174 | ||||||| ||| |||| Sbjct 639272 ATGAATAGGCCTTTGGCC 639255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198198528